The Short-term Physical Effects of Stream Restoration at Big Beef Creek, Kitsap County, Washington

Item

Title
Eng The Short-term Physical Effects of Stream Restoration at Big Beef Creek, Kitsap County, Washington
Date
2018
Creator
Eng Pittman, Ned
Subject
Eng Environmental Studies
extracted text
THE SHORT-TERM PHYSICAL EFFECTS OF STREAM RESTORATION AT BIG BEEF
CREEK, KITSAP COUNTY, WASHINGTON

by
Ned Pittman

A Thesis
Submitted in partial fulfillment
of the requirements for the degree
Master of Environmental Studies
The Evergreen State College
September 2018

iv

©

2018 by Ned Pittman. All rights reserved.

iv

This Thesis for the Master of Environmental Studies Degree
by
Ned Pittman

has been approved for
The Evergreen State College
by

___________________________
John Withey. Ph.D.
Member of the Faculty

___________________________
Date

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ABSTRACT

The short-term physical effects of stream restoration at Big Beef Creek, Kitsap County,
Washington

Ned Pittman

I employed a large-scale stream channel cross section survey, aerial photo analysis, real-time
kinematic GPS survey, and physical measures of aquatic habitat to monitor the effects of
multiple restoration treatments on the stream channel at lower Big Beef Creek, Kitsap, County,
Washington. The stream plan view changed from primarily single thread to a braided pattern
with total channel length increasing by 43% over the study period. Pond area increased 25% and
became 95% more accessible to fish. Physical effects on channel varied. In the main channel,
bank erosion and streambed aggradation increased (367% and 87%, respectively) after wood
placement, but bank erosion was less important than reported by previous studies of the channel.
The main channel changed from net-transport to net-depositional in response to wood placement,
in combination with a heavy sediment load delivered from upstream, during the 2016-17 water
years. In side channels, streambed degradation was more important (and variable) as stream
discharge became directed to them from the aggrading main channel. Results of physical habitat
surveys also varied. The percent of habitat units observed as pools increased over the entire
reach, however four times as many dry reaches of channel were measured post-project. Percent
pool increased similarly at placed wood locations, although 33% of the isolated pools observed
in 2017 were directly associated with the structures. Pool area increased significantly with the
number of days at or above bankfull flow, but not with wood placement. Similarly, maximum
pool depth increased significantly with an increasing number of bankfull days and was similar
comparing pools that received wood to those that didn’t. North American Beaver (Castor
canadensis) altered low water habitat conditions during the first summer post-treatment and
complicate any prediction of future outcomes. The results of this study serve to help answer
outstanding questions about the placement of wood in streams as a restoration tool.

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Table of Contents
List of Figures ............................................................................................................................................... v
List of Tables ............................................................................................................................................. viii
Acknowledgements ...................................................................................................................................... ix
Introduction ................................................................................................................................................... 1
Literature Review.......................................................................................................................................... 4
Study Area .................................................................................................................................................. 16
Area Description ..................................................................................................................................... 16
Land Use and Development .................................................................................................................... 22
Climate .................................................................................................................................................... 25
Precipitation ............................................................................................................................................ 26
Stream Discharge .................................................................................................................................... 27
Restoration History ................................................................................................................................. 29
Methods ...................................................................................................................................................... 34
Floodplain Habitat .................................................................................................................................. 34
Stream Channel Cross Section Survey.................................................................................................... 34
Vertical Thalweg Profile ......................................................................................................................... 38
Physical Habitat Survey .......................................................................................................................... 40
Statistical Analysis .................................................................................................................................. 41
Results ......................................................................................................................................................... 42
Floodplain Habitat .................................................................................................................................. 42
Channel Cross Sections........................................................................................................................... 49
Thalweg Profile....................................................................................................................................... 58
Physical Habitat ...................................................................................................................................... 63
Discussion ................................................................................................................................................... 67
Literature Cited ........................................................................................................................................... 80
Appendices.................................................................................................................................................. 91
Appendix A. Channel cross section plots ............................................................................................... 91
Appendix B. Data plots ......................................................................................................................... 124
Appendix C. Summary data tables. ....................................................................................................... 126

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List of Figures
Figure 1. Proposed network of intensively monitored watersheds across the Pacific Northwest. Those
colored yellow on the map have been in process since 2004 and include the Hood Canal IMW (Image
courtesy of PNAMP). .................................................................................................................................... 3
Figure 2. Location map of the BBC catchment located on the Kitsap peninsula in western Washington
State. The 2013-15 channel configuration is shown in the zoomed image with channel cross section
stations 3-66 indicated with yellow lines (black lines denote upstream cross section of sub-reaches 1-4).
Note the experimental spawning channel and ponds associated with the University of Washington’s BBC
Research Station which has recently suspended operations (upper right of image). ................................. 17
Figure 3 Longitudinal profile of the BBC channel. Noise in the line—pronounced near 2500m upstream—
reflects errors in the GIS layer used to produce it or channel changes since the layer was created. Lake
William Symington appears between 10-12,000 m on the plot. Mean channel gradient (% slope) below the
dam is about 0.01 and 0.008 within the study reach (about 0-2000 m). ..................................................... 18
Figure 4. Geomorphic units mapped within the BBC catchment (from Haugerud 2009). See Table 3 for
description of units...................................................................................................................................... 20
Figure 5. The approximate location of the pre-development channel at lower BBC (yellow) and the
location of channels in 2015 (blue). Note the 3 ponds and artificial spawning channel associated with the
research station facilities in the upper center image. ................................................................................. 23
Figure 6. Summary statistics for the Bridletree precipitation station near BBC, WY's 2008-17. Data and
plot provided by Kitsap Public Utilities District (KPUDhydro n.d.). ......................................................... 26
Figure 7. Peak discharge (Q) values recorded at BBC (1.6 km above the mouth), 1970-2012. Data and
plot provided by (USGS 2018). ................................................................................................................... 28
Figure 8. Stream discharge summary for water years 2014-2017 at BBC in cubic feet per second (cfs).
Data and plots from Kitsap Utility District (KPUD) website (KPUDhydro n.d.). Note that peak Q in
WY2017 is only reported to 400cfs after the placement of wood in the stream affected the gaging station.
.................................................................................................................................................................... 28
Figure 9. Stream discharge summary reported in cfs at BBC for WY's 1970-71 and 1977. Data and plots
from Kitsap Utility District (KPUD) website (KPUDhydro n.d.). These plots represent the conditions
encountered by (Cederholm 1972; Madej 1978, 1982) during their respective study years. ..................... 29
Figure 10. Example of wood structures built during phase 1 of the lower BBC restoration. This set of
structures were built around posts driven into the streambed with a backhoe and included ‘slash bundles’
of smaller logs bound together with rope at their base (the complete restoration design may be viewed at
PRISM 2018). Photographs are of the same structure depicted in the plan and were taken two years after
construction in 2015 - facing upstream (left) and downstream (right). A backwater pool is present
underneath the wood in the photographs and this structure has wracked additional wood since
construction. Upper image (blue arrow indicates flow direction from McCullough 2015). ...................... 32
v

Figure 11. Example of wood structures built during phase 2 of the lower BBC restoration. This set of
structures were placed by helicopter and included ‘slash bundles’ of smaller logs bound together with
rope at their base (Seen best in center image on the left, the complete restoration design may be viewed at
PRISM 2018). Photographs are of the same structure depicted in the plan and were taken one year after
placement in 2016 - facing upstream (left) and downstream (right). The slash bundles associated with this
structure is becoming buried in the sediment, a small pool is associated with the root wad in the middle of
the left image, and aggradation of bed materials around the structure contributed to the activation of a
previously abandoned channel reach (black arrow upper image). Upper image (blue arrow indicates flow
direction from McCullough 2015). ............................................................................................................. 33
Figure 12. Methodology for determining bank erosion, streambed aggradation, and streambed
degradation on plots of channel cross section from lower BBC, WY's 2014-17......................................... 38
Figure 13A. The lower 2 km of the BBC channel during years 2013-2014. Channel lines that are
highlighted in red were wetted during the time of survey. Sub-reaches 1-4 are defined by the three solid
block lines set perpendicular to the channel line along with the ends of the depicted channel.................. 45
Figure 14. Pre- and post-restoration plots of mean bank erosion (m2) at lower BBC during WY’s 2014-17.
Panel A represents the interactions of treatment (wood placement), WY, and channel type on the response
variable. Panel B represents the interactions of treatment, WY, and sub-reach on the response variable.
Error bars = 0.95 CI................................................................................................................................... 51
Figure 15. Pre- and post-restoration plots of streambed degradation (m2) at lower BBC during WY’s
2014-17. Panel A represents the interactions of treatment (wood placement), WY, and channel type on the
response variable. Panel B represents the interactions of treatment, WY, and sub-reach on the response
variable. Error bars = 0.95 CI. .................................................................................................................. 52
Figure 16. Pre- and post-restoration plots of streambed aggradation (m2) at lower BBC during WY’s
2014-17. Panel A represents the interactions of treatment (wood placement), WY, and channel type on the
response variable. Panel B represents the interactions of treatment, WY, and sub-reach on the response
variable. Error bars = 0.95 CI. .................................................................................................................. 53
Figure 17. Pre- and post-restoration plots of mean net change (m2, panels A, B) and mean absolute
change (m2, panels C, D) at lower BBC during WY’s 2014-17. Panels A and C represent the interactions
of treatment (wood placement), WY, and channel type on the response variables. Panels C and D
represent the interactions of treatment, WY, and sub-reach on the response variables. Error bars = 0.95
CI. ............................................................................................................................................................... 54
Figure 18. Pre- and post-restoration plots of bankfull width/depth ratio (w.d) at lower BBC during WY’s
2014-17. Panel A represents the interactions of treatment (wood placement), WY, and channel type on the
response variable. Panel B represents the interactions of treatment, WY, and sub-reach on the response
variable. Error bars = 0.95 CI. .................................................................................................................. 55
Figure 19. Pre- and post-restoration plots of thalweg gradient at lower BBC during WY’s 2014-17. Panel
A represents the interactions of treatment (wood placement), WY, and channel type on the response
variable. Panel B represents the interactions of treatment, WY, and sub-reach on the response variable.
Error bars = 0.95 CI................................................................................................................................... 56
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Figure 20. Summary of change to stream channel cross section area via bank erosion (blue), streambed
degradation (green,) and streambed aggradation (red) at the lower BBC main channel during WY's 201417. ............................................................................................................................................................... 57
Figure 21. Summary of Net change in cross-sectional area of the main channel (and 3 side channels) at
lower BBC, WY’s 2014-2017. Red = Net streambed aggradation (negative values), Blue = Net streambed
degradation/bank erosion combined (positive values). .............................................................................. 57
Figure 22. Pre- and post-restoration plots of mean net change (m2, panels A, B) and mean absolute
change (m2, panels C, D) to the vertical thalweg profile area at lower BBC during WY’s 2014-17. Panels
A and C represent the interactions of treatment (wood placement), WY, and channel type on the response
variables. Panels C and D represent the interactions of treatment, WY, and sub-reach on the response
variables. Error bars = 0.95 CI. ................................................................................................................. 59
Figure 23. Pre- and post-restoration plots of mean streambed aggradation (m2, panels A, B) and mean
streambed degradation (m2, panels C, D) to the vertical thalweg profile area at lower BBC during WY’s
2014-17. Panels A and C represent the interactions of treatment (wood placement), WY, and channel type
on the response variables. Panels C and D represent the interactions of treatment, WY, and sub-reach on
the response variables. Error bars = 0.95 CI. ............................................................................................ 60
Figure 24A. Changes in the thalweg profile of sub-reach 1 (stations 3-18) at lower BBC, 2013-2017. The
location and elevation of the weir is indicated by the vertical dashed line. The observable decrease in
thalweg elevation at 330m (station 13) was associated with a large/deep pool created when a buried log
re-emerged from the channel bed. Phase 2 wood structures were placed within the uppermost portion of
this reach (≥ 429m) in 2016. ....................................................................................................................... 61
Figure 25. Interaction plots of the effect of the number of bankfull days (NumDays), engineered log jam
(ELJ) yes or no, and channel type on habitat unit area at lower BBC, WY’s 2015-17. Panels A and B
display the interaction of these variables on pool area while panels C and D represent non-pool habitats.
Error bars = 0.95 CI................................................................................................................................... 65
Figure 26. Interaction plots of the effect of channel type, number of bankfull days (Numdays), and
engineered log jam (ELJ) yes or no on maximum pool depth at lower BBC, WY’s 2016-17. Error bars =
0.95 CI. ....................................................................................................................................................... 66
Figure 27. Channel configurations before and after channelization at lower Big Beef Creek, 1969-71
(from Cederholm 1972). Flow direction is from top of image to bottom of image. Stations 4-21 from this
study coincide with those (1-18) depicted in this image. ............................................................................ 68

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List of Tables
Table 1. Pacific Salmon species listed under the Endangered Species Act across the Pacific Northwest. .. 2
Table 2. Indicators and decision criteria designed to assess the effectiveness of instream habitat projects
and floodplain enhancement projects as put forth by the Washington Salmon Recovery Board (adapted
from Crawford 2011a, 2011b; O’Neal et al. 2016). ................................................................................... 12
Table 3. Count and definition of geomorphic units comprising the BBC catchment (from Haugerud 2009).
.................................................................................................................................................................... 21
Table 4. Physical characteristics of the BBC Catchment (adapted from Krueger et al. 2010). ................. 25
Table 5. Selected stream discharge statistics for BBC reported in cubic meters per second (m3/s), WY's
2014-17. Data from Kitsap Utility District (KPUD) website (KPUDhydro n.d.). ...................................... 27
Table 6. Description of four sub-reaches comprising the 2km study reach at lower Big Beef Creek 201317. ............................................................................................................................................................... 39
Table 7. Habitat classification scheme modified from Bisson et al. (1982). *Because pools were further
classified in side channels, secondary channel pools are included here as reference only........................ 41
Table 8. Total pond/wetland area and total channel length at lower BBC (1990, 2013-17). The value in
parenthesis represents the percent change over the previous survey period. No ponds were observed on
aerial photographs pre-dating 1990. .......................................................................................................... 42
Table 9. Sources of sediment deposited by reach (year), sub-reach, and historic observations using the
cross sectional survey technique first described by Cederholm (1972) at lower BBC main channel, WY’s
1970-71, 1976-77, and 2014-2017 (adapted from Cederholm 1972; Madej 1978). Note that sub-reach 4 is
included in the 2017 result. ......................................................................................................................... 50
Table 10. Count of physical habitat units by year, treatment and channel type at lower BBC, 2015-17. The
2015 survey extends from the WDFW weir to station 50, 2016-17 surveys were extended further upstream
to station 66................................................................................................................................................. 63
Table 11. Count of physical habitat units directly associated with wood treatments by year, treatment and
channel type at lower BBC, 2015-17. The 2015 survey extends from the WDFW weir to station 50, 201617 surveys were extended further upstream to station 66. .......................................................................... 64

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Acknowledgements

I would like to thank the Washington State Salmon Recovery Board along with the Washington
State Recreation and Conservation Office for their continued support of the Intensively
Monitored Watershed Projects at Hood Canal, The Lower Columbia River, and the Strait of Juan
de Fuca. The Hood Canal Coordinating Council and Hood Canal Salmon Enhancement Group
deserve special recognition, as their dedication and effort toward recovering salmon habitat
should not go unnoticed. The Washington Department of Fish and Wildlife also warrants
recognition for their support in conducting scientific investigations such as the IMWs. I would
also like to give thanks to a growing list of IMW scientific technicians that have helped me to
accomplish this and many other tasks over the last 15 years of my career. Thanks are due to my
supervisor, Dr. Kirk Krueger for his invaluable discussions about salmon habitat, monitoring
procedures, confusing discussions about frequentist vs Bayesian methods, and just generally
being a pretty good guy to work for. Thank you to Dr. John Withey, my Evergreen State College
faculty reader whom I studied under for what seemed like a continuous stretch over the past two
years, I learned a great deal from the experience. Jeff Cederholm deserves my thanks for his
seeing that ‘something in me’, RIP Jeff I think of you often. Without a doubt, I need to thank my
partner and best friend, Sadie Davidson (whom I first met at Evergreen in 1997) for the support
she has provided me as I worked to complete this task. Lastly, I would like to thank and dedicate
this effort to my dog, Mason! Nobody has ever inspired me more.

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Introduction
Around the world, river and stream restoration has become a billion dollar business
(Jähnig et al. 2011; Bennett et al. 2016) with a focus on improving channel and floodplain
function through the addition of wood, boulders, and the re-creation of morphological features
and processes (Roni et al. 2002, 2008; Palmer et al. 2009; Jähnig et al. 2011). Additionally,
where stream restoration efforts concurrently target species recovery, the reconnection of
isolated habitats might address channel processes while simultaneously re-connecting habitat of
imperiled species (Roni et al. 2002).

In the Pacific Northwest (PNW) multiple listings of Pacific salmon and steelhead
(Oncorhynchus spp.) under the Endangered Species Act (ESA; Table 1), have led to some of the
largest investments in stream restoration in North America (Roni et al. 2002; Katz et al. 2007;
Bennett et al. 2016), but the lack of recording basic project details and limited monitoring
severely limit opportunities to learn from and improve on these actions (Bernhardt et al. 2007;
Jähnig et al. 2011; Bennett et al. 2016). Despite this considerable investment in stream
restoration, the benefits of these efforts to Pacific salmon and steelhead populations remain
largely uncertain (Katz et al. 2007; Anderson et al. 2015).

In response to this uncertainty, some 17 intensively monitored watershed (IMW) studies
have been implemented around the Pacific Northwest to test the efficacy of a broad range of
stream restoration actions on salmonid populations (Bennett et al. 2016; Figure 1).

1

Table 1. Pacific Salmon species listed under the Endangered Species Act across the Pacific Northwest.

Species
Steelhead
(Oncorhynchus mykiss)

Chum Salmon
(O. keta)
Coho Salmon
(O. kisutch)
Chinook Salmon
(O. tsawytscha)

Sockeye Salmon
(O. nerka)
Bull Trout
(Salvelinus confluentus)

Population
Puget Sound
Lower Columbia River
Middle Columbia River
Snake River
Upper Columbia River
Hood Canal Summer run
Columbia River
Lower Columbia River

Listing Status
Threatened
Threatened
Threatened
Threatened
Threatened
Threatened
Threatened
Threatened

Date Listed
May 2007
March 1998
March 1999
August 1997
June 2009
March 1999
March 1999
June 2005

Lower Columbia River
Puget Sound
Snake River spring/summer/fall runs
Upper Columbia River spring run
Snake River
Lake Ozette
Columbia/Snake River
Coastal-Puget Sound

Threatened
Threatened
Threatened
Endangered
Endangered
Threatened
Threatened
Threatened

March 1999
March 1999
April 1992
March 1999
November 1991
March 1999
June 1998
November 1999

Big Beef Creek (BBC) is one of four streams comprising the Hood Canal IMW
(HCIMW) complex in Washington State (Figure 1) where a Before-After-Control-Impact
(BACI) study design focuses primarily on Coho Salmon (O. kisutch), utilizing a life cycle
monitoring approach (Anderson et al. 2015; Bennett et al. 2016).

Salmon habitat data under this project are collected utilizing a modified version of the
United States Environmental Protection Agency’s (EPA) environmental monitoring and
assessment protocol (EMAP) as well as additional monitoring associated directly with
restoration projects (Anderson et al. 2015). As an example of this ‘project monitoring’, the
reconnection of the floodplain and the addition of wood structures along lower BBC during
2015-2016 offered a unique opportunity to both re-examine channel processes reported by
historic studies (e.g., Cederholm 1972; Madej 1978, 1982), while simultaneously documenting
how these actions affected current channel processes that drive the formation of and act to

2

maintain habitat for Pacific salmon. Asking the research question; ‘How will the physical
channel respond to restoration treatments at lower BBC?’, I initiated a large-scale cross section
survey of the channel in 2013, two years before project implementation. Having re-located a
number of his original cross section markers, my approach directly follows Cederholm's (1972)
assessment of the physical effects of stream channelization and might more effectively address
reach-level effects of wood placement than studies more focused on the structures themselves
(Nichols and Ketcheson 2013).

Figure 1. Proposed network of intensively monitored watersheds across the Pacific Northwest. Those colored yellow on the map
have been in process since 2004 and include the Hood Canal IMW (Image courtesy of PNAMP).

3

Literature Review

Driven by the Intensively Monitored Watershed studies (IMW), as well as worldwide
efforts intended to decipher the effects of stream restoration actions on fluvial processes and
ecological integrity, a healthy debate exists within the literature as to what constitutes a ‘success’
or a ‘failure’ relative to said restoration actions (Jähnig et al. 2011). This debate is multi-faceted
and will likely take on new direction as restoration science progresses. Rather than arguing what
constitutes a success over a failure in stream restoration, I wish to impress on the reader the
challenges associated with making such an evaluation (also see : Bennett et al. 2016).

Evaluating a stream restoration project is not a neutral or necessarily systematic act, it’s
important to know whether the evaluation is gauged toward: (1) measuring the impact of public
policy, (2) explaining and justifying restoration actions to the local community, or (3) improving
scientific knowledge (Morandi et al. 2014). Any evaluation strategy (choice of monitoring
framework, metrics, and reference) should be adapted to standards associated with the evaluation
goal (Morandi et al. 2014). Citing two main issues regarding the evaluation of restoration
projects: (1) evaluations contribute to fundamental scientific knowledge regardless of their
intended goal, and (2) evaluations provide feedback and guidance for future restoration work and
adaptive management, these authors further stress the crucial nature of assessing whether
restoration objectives have been achieved (Morandi et al. 2014).

4

A review of 345 studies investigating the effectiveness of stream rehabilitation (termed
stream restoration throughout this paper) concluded that the failure of many of these projects to
meet stated objectives was attributable to: (1) inadequate assessment of historic conditions and
factors limiting biotic production, (2) poor understanding of watershed-scale processes that
influence localized projects, and (3) monitoring at inappropriate spatial and temporal scales
(Roni et al. 2008). The authors were unable to draw firm conclusions on several specific types of
restoration actions because of: (1) limited information provided on physical habitat, water
quality, and biota and (2) the short duration and limited scope of most published evaluations
(Roni et al. 2008). However, their findings suggest that: (1) the reconnection of isolated habitats,
floodplain rehabilitation, and instream habitat improvement projects have proven effective for
improving habitat and increasing local fish abundance under many circumstances, and (2)
techniques such as riparian rehabilitation, road improvements (sediment reduction), dam
removal, and restoration of natural flood regimes have shown promise for restoring natural
processes that create and maintain habitats, but that the number of publications related to these
types of actions is lacking (Roni et al. 2008). They conclude that protecting high-quality habitats
and restoring connectivity and catchment processes before implementing instream habitat
improvement projects might be appropriate in the interim (Roni et al. 2008; Anderson et al.
2015).

The published literature might mostly reflect positive results in the area of stream
restoration (Roni et al. 2008, 2015). A single, published study was dedicated to the evaluation of
the occurrence and causes of failure of 161 instream structures among 15 streams located in
southwest Oregon, and southwest Washington States following high streamflow that ranged
5

between a 2 and 10 year event in magnitude (Frissell and Nawa 1992). These authors report a
median failure rate of 18.5% and an median damage (impairment + failure) rate of 60% for
instream structures but note that the incidence of impairment or outright failure varied widely
among streams (Frissell and Nawa 1992). Manner of failure was varied and displayed no
relationship to structure type, however damage was frequently observed in low-gradient channels
and widespread in streams with signs of catchment-wide disturbance, high sediment loads, or
highly erodible bank materials (Frissell and Nawa 1992). Similar to the concept of protecting
quality habitat, restoring connectivity and catchment processes before implementing instream
projects meant to influence habitat (Roni et al. 2008a; Anderson et al. 2015), these authors
suggest that the restoration of fourth order and larger alluvial streams (those with the greatest
potential for fish production in the PNW) will require the reestablishment of natural catchment
and riparian processes over the long-term (Frissell and Nawa 1992).

Stream restoration actions are widespread, numerous, and likely to continue. After many
years of human impacts (e.g., damming and channelization) to the physical and ecological
processes in rivers (Gregory 2006; Morandi et al. 2014), repairing environmental degradation has
become a priority in western industrialized societies (Morandi et al. 2014). Beyond salmon
recovery, legal requirements such as the US Clean Water Act (1972), the Canadian Water Act
(1985), and the EU Water Framework Directive (2000) have driven the use of river restoration as
a management tool that aims to meet the standards set forth in these mandates (Morandi et al.
2014). However, analysis of spatially referenced, project level data of more than 23,000 stream
restoration actions at over 35,000 locations (Washington, Oregon, Idaho, and Montana) that
were mostly initiated between 1991 and 2005 suggest that stream restoration actions are moving
6

forward with little or no knowledge of specific linkages between restoration actions and the
responses of target species (Katz et al. 2007). The authors call for implementation monitoring to
inform targeted effectiveness monitoring required to address this lack of mechanistic
understanding (Katz et al. 2007)

Less rigorous approaches to monitoring stream restoration actions may lead to bias. A
recent survey of water managers in Germany revealed that self-evaluation of restoration projects
was overly positive, with 40% of the respondents admitting that their evaluation was based on
gut feeling, and that only 45% of restoration measures were monitored or occasionally checked
(Jähnig et al. 2011). Other respondents to this survey reported successes in the form of landscape
aesthetic value or benefit to the public, or just portrayed a “condemned to success” attitude
(Jähnig et al. 2011). However, such subjective measures did not correspond with objective
measures made by field investigations at these projects: while study results agreed with many
others that reported improvements in the hydromorphology (see Vogel 2011), the lack of
objectively recorded data meant that water managers could not reasonably evaluate restoration
success (Jähnig et al. 2011). Based upon their findings, these authors argue that : (1) project
goals should be thoughtfully formulated prior to implementation and (2) it is necessary to
monitor river restoration success from different perspectives (Jähnig et al. 2011).

Similarly, in the United States, interviews with 317 stream restoration project managers
from across the country indicated that while less than half of all projects set measurable
objectives for their projects, nearly two-thirds of all interviewees felt that their projects had been

7

‘‘completely successful” (Bernhardt et al. 2007). Data revealed highly successful projects as
those that had high levels of community involvement and an advisory committee (Bernhardt et
al. 2007). A key finding from these interviews was that the mere publishing of more scientific
papers would not likely lead to meaningful improvements in restoration practice—the authors
recommend direct, collaborative involvement between scientists, managers, and practitioners to
forward progress in the science and application of stream restoration (Bernhardt et al. 2007).

In examination of 44 pilot projects (physical restoration measures aimed to restore or
enhance the ecological condition of waterbodies) that included an evidence-based evaluation of
success, researchers indicated that: (1) evaluation strategies are often too poor in quality to
understand the link between a project and ecological changes, (2) contradictory conclusions are
often drawn, making the determination of success or failure difficult, and (3) the most positive
conclusions about the effects of restoration generally come from the poorest evaluation strategies
(Morandi et al. 2014). Poor evaluation strategies were not based in science, the choice of metrics
more related to the political authority in charge of the evaluation than to river characteristics or
restoration measures (Morandi et al. 2014). The results of the study emphasized the difficulty in
producing an evaluation of stream restoration success without clearly defined standards and
ecological references related to the objectives of the project (Morandi et al. 2014)

There is no lack of decision matrices and/or strategies designed to guide the evaluation of
stream restoration projects, with objectives that can be quite variable. Some emphasize the
measurement of geomorphic characteristics of the restored stream reach based on the

8

understanding that the interactions between channel, floodplain, and stream discharge provide a
framework on which aquatic and riparian function is supported (Kondolf and Micheli 1995).
These authors cite a growing body of literature that argues for geomorphic factors as primary
determinants of spatial and successional patterns of biological communities to back this
emphasis in their evaluation criteria (Kondolf and Micheli 1995).

Other strategies emphasize an ecological perspective. Believing healthy, self-sustaining
river systems as important providers of goods and services upon which human life depends,
Palmer et al. (2005) propose five criteria for measuring success; (1) projects should be conceived
on a specified guiding image of a more dynamic/healthy river that could exist at the site, (2)
measurably improved ecological condition, (3) the river system must be more self‐sustaining and
resilient to perturbation allowing for only minimal maintenance, (4) no lasting harm should be
inflicted on the ecosystem during the construction phase, and (5) both pre‐ and post‐assessment
must be completed and the data made public. While further providing literature-based guidelines
and indicators that could be used in the evaluation of these five measures of success, the authors
emphasize that conservation of streams/rivers (before they become degraded) remain a priority
(Palmer et al. 2005).

Some may focus even more broadly, considering stakeholder interactions with the
project. One such strategy to assess river restoration success considers 49 indicators across 17
indicator categories as related to 13 restoration objectives (Woolsey et al. 2007). This robust
assessment begins at the planning phase and considers acceptance by the public and aesthetic
landscape value among a host of other indicators that focus largely on hydrologic/geomorphic
9

conditions and biological communities. These authors cite the vital nature of stream restoration
assessment for adaptive management, evaluation of project efficiency, optimizing future efforts,
and gaining acceptance with the public (Woolsey et al. 2007).

In 2011, the Washington State Salmon Recovery Funding Board (SRFBD) offered
protocols for the effectiveness monitoring of a range of salmonid habitat restoration actions.
Operating under the definition of a restoration project as that of Morandi et al. (2014)—a
homogenous group of restoration actions aiming to achieve one or several restoration objectives
(a project can be implemented at different times or at different sites)—and the restoration
objectives of my target project (PRISM 2018), my interest lies with the protocols for monitoring
the effectiveness of instream habitat and floodplain enhancement projects (Crawford 2011a,
2011b).

Indicators and decision criteria advanced by these protocols (Table 2) are designed to
answer a series of questions. For instream habitat projects, questions answered by this approach
include: (1) Have artificial instream structures (AIS, aka placed wood structure) as designed
remained in the stream for up to ten years for the sampled instream structure projects? (2) Has
juvenile salmon abundance increased significantly in the impact area for the sampled instream
structure projects within ten years? and (3) Has stream morphology improved significantly in the
treated stream reach for the sampled instream structure projects within ten years (Crawford
2011b)? And at floodplain enhancement projects (Crawford 2011a), a longer list:


How many acres of new off-channel or floodplain habitat have been created?
10



What flood stage is necessary for the newly accessible habitat to be available?



What is the frequency and duration of inundation for the new habitat?



Has the removal and/or setback reduced channel constraints and increased flood
flow capacity for ten years?



Has the channel become more frequently connected with the floodplain?



Has additional off-channel habitat been created within 10 years?



Has the floodprone width increased?



What is the level of fish use?



What species and life stage use the newly available habitat?

The approach designed to assess the effectiveness of instream habitat projects tests the
null hypothesis that the placement of wood structures in the stream has had no effect upon: (1)
Improving stream morphology and fish habitat as measured by thalweg residual pool vertical
profile area and mean residual depth, and (2) Increasing juvenile abundance in the impacted area
(Crawford 2011b). Similarly, at floodplain enhancement projects, the null hypothesis that the
removal or setback of dikes, riprap, roads, or landfills, or reconnected side channels along the
stream has had no significant effect upon: (1) providing slow water habitat for juvenile rearing,
(2) improving stream morphology and fish habitat as measured by thalweg residual pool vertical
profile area, mean residual depth, and flood-prone width, (3) increasing the presence and
connection of off-channel and side channel habitat as measured through hydraulic modeling and
visual observation and repeated topographic and field surveys, and (4) increasing juvenile fish
abundance in the impacted area is tested (Crawford 2011a; Table 2).

11

Table 2. Indicators and decision criteria designed to assess the effectiveness of instream habitat projects and floodplain
enhancement projects as put forth by the Washington Salmon Recovery Board (adapted from Crawford 2011a, 2011b; O’Neal et
al. 2016).

Project Category
Instream Habitat Projects

Indicators Tested





Floodplain Enhancement Projects










Mean thalweg residual
pool vertical profile area
Mean residual depth
Log10 volume of large
wood
Stability of structure
placement
Mean thalweg residual
pool vertical profile area
Mean residual depth
Bank-full height
Bank-full width
Flood prone width
Proportion of the reach
with three-layer riparian
vegetation
Mean canopy density
along the banks
Level of habitat
connection

Decision Criteria
Linear regression or Paired t-test
for preproject mean against
postproject mean, alpha = 0.10 for
one-sided test; 20% increase over
baseline considered biologically
significant
Linear regression or Paired t-test
for preproject mean against
postproject mean, alpha = 0.10 for
one-sided test; 20% increase over
baseline considered biologically
significant

As defined by these strategies, the stream channel seems to be considered separate from
its floodplain—by virtue of separate protocols to assess the effectiveness of restoration projects
located at either—and thus side channels are considered separate from the channel when
assessing the effectiveness of restoration actions. This approach might reflect different levels of
salmon productivity or population use among habitat types (Bellmore et al. 2013) or observed
increases in Coho Salmon production within restored/reconnected examples of these areas
(Henning et al. 2007; Roni et al. 2008; O’Neal et al. 2016). However, it might deviate from
traditional geomorphic models that consider interactions between channel, floodplain, stream
discharge, and sediment availability as a framework on which aquatic and riparian function is
supported (Leopold et al. 1992; Kondolf and Micheli 1995; Lane and Richards 1997; White et al.
12

2010) along with process-based principles of stream restoration for salmon recovery (Beechie et
al. 2010; Anderson et al. 2015).

Many—perhaps most—of the stream restoration actions aimed at salmon recovery are
based on perceptions of ‘good’ or ‘desirable’ habitat types, or on a limited selection of stream
restoration techniques developed over the past several decades (Roni et al. 2008a; Beechie et al.
2010). In the same way, many restoration designs/evaluations might be based upon those same
perceptions. In review of 109 studies that reported on physical response to instream structures,
researchers report significant increases (>50%) in pool frequency, pool depth, woody debris,
habitat heterogeneity, complexity, spawning gravel, sediment retention, and organic matter
retention after placement of instream structures (Roni et al. 2008, 2015). This analysis however,
does not separate constructed habitats from those that are formed and maintained through natural
processes after the restoration treatment is complete (i.e., the difference between pools dug by
backhoe and those scoured by complex flow patterns around structures added to the existing
system). With a very strong tendency to report responses in pool area/frequency/depth in
evaluations of instream restoration projects designed at increasing salmon habitat (Cederholm et
al. 1997; Roni and Quinn 2001; Roni et al. 2015; O’Neal et al. 2016; Jones et al. 2017), it seems
critical to understand and communicate the method of pool formation along with any metrics that
describe the habitat and its maintenance over time.

Similarly, in review of 83 published studies that reported on some type of physical
response (other than structure stability), Roni et al. (2015) only identified three investigations

13

into the response of a stream channel to the placement of wood without cabling/anchoring or
minimal disturbance to the streambed during construction (see: Nichols and Ketcheson 2013;
Carah et al. 2014; Jones et al. 2017). A trend toward ‘less engineered’ approaches to stream
restoration (particularly non/less-rigid wood structure placement in streams < 20 m width;
(Bisson et al. 2003; Kail et al. 2007; Roni et al. 2008, 2015) then, might strengthen the argument
by Morandi et al. (2014) that clear ecological references be observed from the setting of project
objectives through the reporting of any evaluation of project effectiveness. While wood ‘placed’
in the stream channel as part of a constructed habitat might have clear project objectives
associated with it (i.e., maintenance of a specific habitat type), wood that is placed by modern
approaches may not. Project objectives might be described as ‘to improve channel heterogeneity’
or ‘promote sediment stability’ while offering a specific number of pools expected to be created
over the restoration reach (PRISM 2018).

In summary, the determination of ‘success’ or ‘failure’ at stream restoration projects is
not a neutral act, requiring evaluation strategies to be designed early in the project planning
process and be based on clearly-defined objectives (Morandi et al. 2014). The published
literature might mostly reflect positive results from stream restoration actions (Roni et al. 2008a,
2015), and thus debate surrounds the efficacy of stream restoration projects to meet their
objectives (Katz et al. 2007; Anderson et al. 2015). However, stream restoration actions are
widespread, numerous, and likely to continue. Restoration projects and their associated
evaluations might be limited by perceptions of ‘good’, ‘bad’, and ‘desirable’ habitat conditions
(Roni et al. 2008; Beechie et al. 2010; Jähnig et al. 2011). Less rigorous approaches (or those
that are politically driven) to monitoring/evaluating stream restoration actions might lead to bias
14

and/or contradictory results making the determination of success or failure difficult (Jähnig et al.
2011; Morandi et al. 2014). However, robust monitoring guidance exists within the literature
(i.e., Kondolf and Micheli 1995; Palmer et al. 2005; Woolsey et al. 2007) and has been
developed institutionally (Crawford 2011a, 2011b; O’Neal et al. 2016). More than 100 years of
controversy surrounding the placement of wood in streams to create fish habitat (Roni et al.
2015) coupled with trends toward ‘less engineered’ restoration treatments (Bisson et al. 2003;
Kail et al. 2007; Roni et al. 2008, 2015) signals gaps in our understanding of how stream
channels respond to these efforts.

Extensive reviews of the literature have suggested that future research into the effects of
placed wood on stream channels/physical habitat should focus on addressing the following
questions:


How do responses differ among types of wood placement (i.e., anchored vs. notanchored)?



What amounts/types/sizes of wood are needed to achieve a physical response in
different sizes and types of stream channels?



How quickly might a response be observed and how long might observed
‘improvements’ be expected to last?



What are the stream channel types or geomorphic settings where wood placement
might result in minimal or even detrimental physical effects (i.e., increased erosion
and habitat degradation)? (Roni et al. 2008, 2015)

15

The following investigation into the effects of wood placement at lower Big Beef
Creek—under the umbrella of the HCIMW—is additive to and will help guide detailed longterm/region-wide physical monitoring efforts called for by these authors to answer these
questions (Roni et al. 2008, 2015).

Study Area

Area Description

Big Beef Creek—a gravel bedded stream—drains 38 km2 of forested/rural-residential
landscape located on the west-central Kitsap Peninsula in Washington State (Figure 2). The
glacial and human histories of this landscape have naturally divided the catchment into distinct
sections (Cederholm 1972; Madej 1978, 1982; Quinn and Peterson 1996; Booth et al. 2003;
Anderson et al. 2015)

16

Figure 2. Location map of the BBC catchment located on the Kitsap peninsula in western Washington State. The 2013-15
channel configuration is shown in the zoomed image with channel cross section stations 3-66 indicated with yellow lines (black
lines denote upstream cross section of sub-reaches 1-4). Note the experimental spawning channel and ponds associated with the
University of Washington’s BBC Research Station which has recently suspended operations (upper right of image).

The upper section, marked by broad marshes (Figures 2 and 3) and gentle slope, lies
within Russell-age recessional outwash terrain formed by a continuous south-flowing outwash
stream (Haugerud and Tabor 2008). Stranded alluvial flats (mapped as ‘al’; Figure 4; Table 3) in
the middle reach of the creek and deformed outwash flats near lake William Symington suggest
at least 23 m of late Holocene uplift above the Seattle fault (Haugerud 2009). No obvious
sources of sediment delivery to the modern upper channel and a natural marshy area (now
dammed as lake William Symington) at the head of channel transition, suggests that most of the

17

coarse sediment delivered to the lower channel originates from tributaries (up to and including
the LB tributary to lake William Symington), mass-wasting, and localized bank/bed erosion in
both recent and historic times. Measurements of the slowly advancing delta that formed in the
upstream end of the lake (post-dam construction) seem to confirm this observation (Madej 1978).

160
140
120

Elevation (m)

100
80
60
40
20
0
0

2000

4000

6000

8000

10000

12000

Distance Upstream (m)

14000

16000

18000

Figure 3 Longitudinal profile of the BBC channel. Noise in the line—pronounced near 2500m upstream—reflects errors in the
GIS layer used to produce it or channel changes since the layer was created. Lake William Symington appears between 1012,000 m on the plot. Mean channel gradient (% slope) below the dam is about 0.01 and 0.008 within the study reach (about 02000 m).

The lower section of BBC cuts into the landscape, with the modern stream flowing
northerly for about 10 km to Hood Canal. Transition to the lower section begins with a canyon
reach where wood and ≤ gravel-sized sediments are relatively rare. Glacial till is sometimes
exposed on the streambed within this reach. A channel headcut (upstream moving erosion of the
streambed) has developed in an exposed till layer where the valley-bottom expands, and
stream/sediment flows are increased by valley-wall tributaries. This feature affects upstream
18

migration of spawning salmon at some stream discharges and contributes to the bedload of the
stream. The reach downstream of this point is characterized by erodible terraces (stranded
alluvial flats) that are hydraulically disconnected (Haugerud 2009) from the channel and have
been perceived to be major contributors to downstream sediment deposits (Cederholm 1972).
Further downstream, the channel is periodically constricted by these stranded alluvial deposits,
large alluvial fans, and debris flow deposits as testament to the erodible nature of this landscape
(Haugerud 2009; Figure 4). My study reach includes channel reaches confined by the lowermost
alluvial fan/debris flow deposit along with the relatively broad floodplain conditions downstream
of river km 1.0 (Figures 2 and 4).

19

Figure 4. Geomorphic units mapped within the BBC catchment (from Haugerud 2009). See Table 3 for description of units.

20

Table 3. Count and definition of geomorphic units comprising the BBC catchment (from Haugerud 2009).

Unit
Code
af

Count (%)

al

34 (0.19)

ch

6 (0.18)

esker

1 (0.02)

fill

5 (0.005)

gb

1 (26.84)

gf

18 (36.43)

gfr

4 (9.14)

gp

10 (10.17)

h

30 (2.56)

hal

5 (0.4)

kettle

3 (0.28)

kk

14 (2.7)

ls

17 (0.18)

owb

1 (0.003)

owr

28 (2.23)

w

4 (1.15)

wtr

9 (0.17)

h0

1 (0.04)

16 (0.2)

Definition
Alluvial fan - Moderately sloping (nearly 2-5°) surface, mostly conic, at drainage
confluences and along toes of valley walls. Slope suggests sediment transport is
dominated by debris flow or infrequent floods.
Alluvial flat - Stream-shaped surface, either depositional or strath. Could be latest
Pleistocene or Holocene in age.
Channel—Smooth-walled channels, apparently water-carved, but without apparent
source or sink for flowing water.
Esker—Sinuous narrow ridge
Artificial fill—Surface of fill bodies beneath highways and railways, mapped because
of possibility of failure during severe seismic shaking
Glaciated bedrock surface—Ice-modified ground that has lumps or transverse ribs
(eroded bedding) indicative of erosion from bedrock rather than from unconsolidated
material
Fluted glaciated surface - Characterized by well-organized flutes that have elongation
ratios (length/width) typically greater than 10.
Rippled fluted glaciated surface—Fluted glacial surface that has transverse ripples or
“chatter marks.”
Pockmarked glaciated surface—Weakly fluted ground that has irregular pits and
lumps.
Hillslope—Steep (commonly, 20-35º) surface that appears to be dominated by
colluviation, debris-flow, shallow-landslide, and
other mass-movement processes. Mostly with distinct breaks in slope at upslope and
downslope margins. Cut into adjacent topography.
Holocene alluvial flat—Stream valley floor. Recognized by low slope, planarity, and
position in topographic lows along active drainage paths.
Kettle—Closed depression that has moderately to steeply sloping sides; commonly
embedded in outwash flat
Kame-kettle surface—Irregular ground characterized by steep-walled closed
depressions (kettles), collapse features, eskers, and common alluvial flats
Landslide—Surface of deep-seated landslide, recognized by uphill scarps, bulbous
toes, position in hillslope hollows, and (locally) rumpled surface. Queried where
identity as landslide is less certain.
Outwash flat of Bretz age—Alluvial flat graded to glacial Lake Bretz. Queried where
Bretz age is less certain
Outwash flat of Russell age—Alluvial flat graded to glacial Lake Russell.
Wetland—Planar surface of low slope. Identification as wetland corroborated by
approximate correspondence with third-party wetland inventories (Kitsap County GIS,
2006) and limited field checking.
Water
Older hillslope—Position and lower gradient argue that older hillslope developed in a
regime of lower slope stability, perhaps without vegetation cover

21

Land Use and Development

Big Beef Creek was dammed in 1965 at the transition between the upper and lower
sections creating Lake William Symington as a central water feature for a housing development
(Williams 1970). The dam was redesigned/rebuilt in 1992—while information relative to
changes to the structure are not readily available—period news articles suggest that changes to
the spillway were blamed for considerable erosion to downstream bluffs. During the original
construction of the dam, the stream was channelized for about 500m below the structure. The
dam is laddered for fish passage.

At the same time, the University of Washington (UW) developed lowermost 1.0 km of
BBC where it meets Hood Canal (Madej 1978; Figures 2 and 5). Until operations were recently
halted, the UW’s BBC Research Station provided a setting for many ecological investigations.
Examples include: (1) The effects of real-estate development on fish populations and other
biological indicators (Williams 1970), (2) the physical and biological effects of stream
channelization (Cederholm 1972), (3) the response of a stream channel to an increased sediment
load (Madej 1978, 1982), and the influence of habitat complexity and size on the survival of
Coho Salmon (Quinn and Peterson 1996). Shortly after construction of the research station the
then Washington Department of Fisheries (WDF) channelized about 0.6 km of the creek that
became braided (probably within existing blind tidal channels) after being diked from its channel
(Cederholm 1972; Madej 1978, 1982). Windfalls and logjams had contributed to the aggradation
of bed material leading to negative effects on salmon populations via gravel instability (loss of
redds) and predation by dogs (Cederholm 1972). During the summer of 1970 an additional 800
22

m3 of bed material was excavated at the mouth of the creek and a fence-type weir was
constructed to aid in the early investigations of salmonid response to land-use changes within the
catchment (Cederholm 1972). Excavation of bed material from around the location of the weir
has continued periodically since then, the last occurrence in 2014.

Figure 5. The approximate location of the pre-development channel at lower BBC (yellow) and the location of channels in 2015
(blue). Note the 3 ponds and artificial spawning channel associated with the research station facilities in the upper center image.

The WDFW continues to operate a weir-type salmon trap at the mouth of BBC today
(updated mid-1980’s; Matt Gillum, WDFW, personal communication). Trap data is primarily
used to provide and index of Coho Salmon abundance within the greater Hood Canal catchment
for harvest modeling efforts along with HCIMW monitoring. When the weir panels are in place
23

at this structure it acts as a dam (Madej 1978, 1982; ENTRIX 2010) contributing to aggradation
of the stream reach (Cederholm 1972; Madej 1978, 1982; ENTRIX 2010). Presently, salmonidbased research within the catchment include the HCIMW and investigations into the survival of
steelhead (O. mykiss) outmigrants to Hood Canal and Puget Sound.

The catchment was 74% forested and 5% developed in 2010 with an estimated total
channel length of 58 km (Krueger et al. 2010; Table 4). Additional timber harvest and land
conversion has occurred since that time. The BBC catchment was most likely logged near the
mouth at Hood Canal as early as 1860 following the establishment of the town of Seabeck and
the first lumber production mill on Hood Canal. Camp Union (near the lake) became a central
hub for a logging railroad by the 1920’s and the catchment was logged to the streambanks by
1940. Logging began again in the late 1950’s (Madej 1978, 1982) and continued through the
early 1980’s when land began being converted from timber to rural/residential use (much of the
‘forested’ extent reported above is in this land-use type). Harvest of a third crop of timber from
the catchment has been occurring since the initiation of the HCIMW, however modern forestry
practices intended to protect the waterway are being observed.

24

Table 4. Physical characteristics of the BBC Catchment (adapted from Krueger et al. 2010).

Attribute

Measure

Area (km2)

38,8

Max. Elevation (m)

151

Geology

Quaternary sediment (glacial till and alluvium)

Mean Annual Precip.

105 cm/y

Forest – Developed (%)

74 F
5 D

Est. N Road Crossings

41

Total Reach Length (km)

58.0

N Reaches

109

Strahler Order

3

Drainage Pattern

dendritic

Drainage Density

1.5

Focal Species

Coho, Steelhead

Climate
The Kitsap Peninsula has a characteristically marine climate typified by short, cool, dry
summers and extended, mild, wet winters. Winter storms generally approach western
Washington from the southwest, leading to relatively high winter rainfall from storms funneled
into the region by a topographic gap formed by the Olympic Peninsula and the Black Hills
(Kitsap Public Utility District et al. 1997). Moderated by the Pacific Ocean and inland marine
waters, temperatures on the Kitsap Peninsula infrequently drop below freezing or exceed 27°C
(Kitsap Public Utility District et al. 1997).

25

Precipitation
The Kitsap Public Utilities District (KPUD) maintains data from a countywide network
of precipitation stations at their website (KPUDhydro n.d.). The median yearly precipitation total
at the Bridletree station (Seabeck Creek catchment) was 49.82 over the past eight water years
(Oct. 1 – Sept. 30) including the four years of my study period (Figure 6). The Bridletree station
probably best represents the average precipitation conditions over BBC, however two tributaries
to the creek (lower section) extend up the flanks of Green Mountain where localized
precipitation amounts might be greater due to orographic effect (Kitsap Public Utility District et
al. 1997).

Figure 6. Summary statistics for the Bridletree precipitation station near BBC, WY's 2008-17. Data and plot provided by Kitsap
Public Utilities District (KPUDhydro n.d.).

26

Stream Discharge
Stream discharge (Q) data has been recorded at BBC near stream kilometer 1.6 since
around 1969, however records are sometimes discontinuous. The KPUD assumed operation of
the gaging station from the United States Geological Survey (USGS) in 2012 with real-time data
for BBC available at their website (KPUDhydro n.d.). Stream discharge data plots representing
my study period (WY2014-17) at lower BBC are presented in Figure (8). The peak Q (32.7 m3/s)
observed during the study period occurred in WY2016, after phase 1 wood placement but before
the phase 2 effort (Table 5). Alteration of the gaging site by wood placement has limited the peak
value the KPUD reports to the 1.5-year recurrence interval discharge (the ‘bankfull’ discharge)
of 400 cfs (11.33 m3/s). The peak Q observed in WY2016 ranked within the top 10 ever recorded
at BBC (USGS 2018; Figure 7). A water year (WY) is defined as the period from October 1 –
September 30. Streamflow data from previous studies of BBC mentioned by this effort are
provided in Figure (9).
Table 5. Selected stream discharge statistics for BBC reported in cubic meters per second (m3/s), WY's 2014-17. Data from
Kitsap Utility District (KPUD) website (KPUDhydro n.d.).

Water
Year
2014
2015
2016
2017

Days
365
365
366
365

Mean Q
0.88
1.10
2.18
1.90

WY Low Q (Date)
0.09
0.11
0.08
0.09

(9/12/14)
(8/10/15)
(8/29/16)
(9/15/17)

WY Peak Q (Date)
15.04
14.98
32.7
11.33*

(3/6/2014)
(12/10/14)
(12/9/15)
(11/26/17)

Number of
bankfull days
3
4
22
8

*Damage to the gaging station by wood placed during the project limits what KPUD reports as a peak Q.

27

Figure 7. Peak discharge (Q) values recorded at BBC (1.6 km above the mouth), 1970-2012. Data and plot provided by (USGS
2018).

Figure 8. Stream discharge summary for water years 2014-2017 at BBC in cubic feet per second (cfs). Data and plots from
Kitsap Utility District (KPUD) website (KPUDhydro n.d.). Note that peak Q in WY2017 is only reported to 400cfs after the
placement of wood in the stream affected the gaging station.

28

Figure 9. Stream discharge summary reported in cfs at BBC for WY's 1970-71 and 1977. Data and plots from Kitsap Utility
District (KPUD) website (KPUDhydro n.d.). These plots represent the conditions encountered by (Cederholm 1972; Madej 1978,
1982) during their respective study years.

Restoration History
Completed in 2002, the ‘Big Beef Creek Preservation Project’ set a project goal to
preserve the UW BBC Research Station as an active fisheries research center for use in the
development and practice of studies investigating wild Hood Canal salmon. Citing loss of natural
wetland function (including sediment entrapment), the proposal was to preserve some 120,000m2
of wetland habitat by removing all/part of an elevated well access roadway that dissects the
floodplain. Total project cost was $168,658 (PRISM 2018).

The re-introduction of summer Chum Salmon to BBC was completed in 2005 at a cost of
$175,000. The re-establishment of the experimental spawning channel associated with the UW
Big Beef Creek Research Station was the only ‘physical’ component of this project (PRISM
2018).

Also completed in 2005 was the development and analysis of an orthophoto for the BBC
catchment ($40,000). Citing salmon recovery goals: (1) establish specific thresholds for

29

catchment impervious surface and native forest cover, (2) reduce peak flows, (3) retrofitting of
the Seabeck highway causeway, and (4) setting riparian buffer width based upon floodplain
width and channel migration zone (CMZ) project sponsors intended their products as aids in
catchment planning (PRISM 2018).

The Washington Department of Fish and Wildlife (WDFW) acquired about 1.2 km2 of
uplands, wetlands, and lakes in the headwaters of four Hood Canal salmon streams (including
BBC). This project was completed in 2006 at a cost of $840,000 (PRISM 2018).

In preparation for an extensive restoration effort, the ‘Lower Big Beef Creek Design’ was
completed in 2011 at a cost of $79,000. Seeking to restore properly functioning floodplain and
channel conditions within the lower 1.6 km of BBC, this design-phase project intended to: (1)
minimize the elevated well-access road prism that dissects the floodplain, (2) reconnect several
side channels and wetlands, and (3) install as many as 30 log jam structures (PRISM 2018).

The Great Peninsula Conservancy completed the ‘Big Beef Creek Preservation’ project in
2012. This project acquired one of the few remaining land parcels in private ownership along
lower BBC and put it into conservation at a cost of $252,496 (PRISM 2018).

Completed in 2013 at a cost of $100, 000, the ‘UW research station wetlands restoration
project’ relocated a well that services the facility in preparation for future project plans. The
30

effort also lined the artificial spawning channel with boulders as mitigation for potential effects
of future projects on summer Chum Salmon spawning habitat in the lowermost reaches of the
system (PRISM 2018).

The ‘Final design’ of an extensive restoration effort was completed in 2014. This
included the completion of the design/planning phase, survey work, and permitting costs for the
phase 1 and 2 portions of ‘Lower Big Beef Creek Restoration’ over the lower 1.6 km of the
creek. The cost of this effort was $70.061 (PRISM 2018).

Initially planned as a single phased project over the lower 1.6 km of the creek, ‘Lower
Big Beef Creek Restoration’ became a three-phase project as additional catchment priorities
were developed. Phases 1 and 2 were completed during the work windows of 2015 and 2016
respectively, while phase 3 work began during the summer of 2017 (ongoing scheduled to end
3/2019). Phase 1 and 2 project objectives included: (1) Remove the well access road dissecting
the floodplain to eliminate channelization and restore habitat connectivity, (2) remove two
buildings and 2523 m3 of fill material—restore to wetland habitat, and (3) improve in-stream
habitat complexity by adding (to the channel) 10 new wood structures and reinforcing 13
existing structures with additional wood placement (Figures 10-11). The phase 3 objectives aim
to promote sediment stability and enhance channel complexity to improve winter habitat
conditions for juvenile salmon through additional wood placement at key locations between the
lower project site and the channel headcut near Lake William Symington. Additionally,
livestock-fencing and riparian plantings are planned along a productive tributary in the upper

31

catchment. Costs of the three phase of the project were $1,370,810 (phases 1, 2) with an
additional $229,840 to complete phase 3 (PRISM 2018).

Figure 10. Example of wood structures built during phase 1 of the lower BBC restoration. This set of structures were built
around posts driven into the streambed with a backhoe and included ‘slash bundles’ of smaller logs bound together with rope at
their base (the complete restoration design may be viewed at PRISM 2018). Photographs are of the same structure depicted in
the plan and were taken two years after construction in 2015 - facing upstream (left) and downstream (right). A backwater pool
is present underneath the wood in the photographs and this structure has wracked additional wood since construction. Upper
image (blue arrow indicates flow direction from McCullough 2015).

32

Figure 11. Example of wood structures built during phase 2 of the lower BBC restoration. This set of structures were placed by
helicopter and included ‘slash bundles’ of smaller logs bound together with rope at their base (Seen best in center image on the
left, the complete restoration design may be viewed at PRISM 2018). Photographs are of the same structure depicted in the plan
and were taken one year after placement in 2016 - facing upstream (left) and downstream (right). The slash bundles associated
with this structure is becoming buried in the sediment, a small pool is associated with the root wad in the middle of the left
image, and aggradation of bed materials around the structure contributed to the activation of a previously abandoned channel
reach (black arrow upper image). Upper image (blue arrow indicates flow direction from McCullough 2015).

33

Methods

Floodplain Habitat
Beaver pond/wetland locations were located on aerial imagery (years1990, 2013, 2015,
2017) and polygon features were created within the ESRI ArcGIS® environment to represent
their area and change over time. Extensive field reconnaissance in all years but 1990 aided in the
generation of these files. Beaver dam locations/elevations were collected as line files with
Trimble GeoExplorer® real-time kinematic global positioning system (RTKGPS) (± 1 m) during
2016-17.

Channel Locations were identified and mapped with RTKGPS (2 m horizontal accuracy)
at study start, in 2016 when new channels began appearing on the landscape, and again in 2017
to document further change over that WY. These data were smoothed within the ESRI ArcGIS®
environment using integrated tools affording a more accurate determination of channel lengths.

Stream Channel Cross Section Survey

The primary tool that I utilized to monitor response of the stream channel at lower Big
Beef Creek to restoration actions completed in 2015 and 2016 was the stream channel cross
section. The shape of a stream channel cross section (at any location) is a function of the
streamflow, the character and composition of bed and bank materials (including vegetation), and
the quantity and character of the sediment moving through the section (Leopold et al. 1992).
Furthermore, the mean bed elevation (channel depth) at a stream channel cross section not only
34

depends on streamflow but is closely related to changes in width, depth, velocity, and sediment
load during the passage of high flow events (Leopold et al. 1992).

Stream channel cross sections have been used as the primary tool in calculations of
geometric, hydraulic, and sediment transport parameters (Madej 1978, 1982; Leopold et al. 1992;
Hardy et al. 2005), to provide a method of repeatable measures to evaluate the effects of
management actions on streams and rivers (Cederholm 1972; Olson-Rutz and Marlow 1992),
and in channel and road crossing design (Hardy et al. 2005). As management actions in streams
have turned toward restoration, the channel cross section has further emerged as a monitoring
tool in the evaluation of change in stream channel morphology around engineered structures
placed in streams (Nichols and Ketcheson 2013). Noting changes in channel bed morphology
further away from the structures they studied, these investigators modified their study design to
include between structure cross sections. However, these additional stream channel cross
sections lacked background information relative to their natural variability in response to
streamflow and sediment (Nichols and Ketcheson 2013).

My design followed the approach of, and utilized many of the same stream channel cross
sections as, Cederholm (1972) to evaluate the physical response of the stream channel to
channelization. Madej (1978, 1982) similarly studied changes in sediment transport rates in BBC
related to an increased sediment yield from recent land use changes. In comparison with
topographic surveys completed at the same time, Cederholm (1972) reported a 13% overreporting of upstream sediment yield, a 7% under-reporting of streambed degradation, along with

35

an 8% under-reporting of streambank erosion values when utilizing the stream channel cross
section technique to estimate—and identify sources of—volumetric change of bed material at
lower BBC.

Stream channel cross section data was collected at 48 (2013-2015) and 64 (2016-2017)
locations spaced approximately 33 m (stations 3-50) and 30 m (stations 51-66) apart along the
previously channelized section of the stream and continuing upstream of the wood placement
sites (Figure 2). I utilized maps from Cederholm (1972) and any remaining monuments marking
his original cross section survey to duplicate effort as accurately as possible. A permanent
benchmark and a series of elevation control points were established throughout the study area
using a combination of Trimble GeoExplorer® real-time kinematic global positioning system
(RTKGPS) accurate to within 5 cm vertical and simple transit techniques utilizing a rod and
level. The benchmark and control points were intended to facilitate reference to a datum point
(MHW NAVD88) and allowed for greater consistency in the re-survey process.

The end points of each cross section were monumented with wooden stakes and flagging
tape (where Cederholm’s monuments were missing) and located with RTKGPS to 1m horizontal
accuracy. End points were set approximately 2 m inland from the ordinary high-water mark
(OHW) on both right and left banks (RB, LB) of the channel as identified in 2013 (stations 3-50)
and 2016 (stations 51-66). A compass bearing along the line between the RB and LB monuments
was collected to aid in their relocation or replacement. Where the location of the stream channel
had changed since these previous surveys, channel cross sections were extended in length to

36

include the new channel location. This technique was further utilized in subsequent years to
capture side channel activation, new channel creation, and bank erosion when feasible.

Stream channel cross section data was collected yearly (2013-17) during late-summer
low-flow conditions utilizing rod, level, and tape procedures. A CST/berger Lasermark®
automatic self-leveling rotary laser rated at ± 0.6 cm over 900 m was used to complete a transit
upstream through the study reach and back downstream to close at the primary benchmark each
year. Channel cross section data was collected as side-shots from the transit line completed with
the instrument. A tape was also laid along the channel thalweg (a line following the deepest part
of the channel) during 2016 to provide a detailed survey of water surface gradient and more
precise thalweg elevations than those gathered only at channel cross sections.

Elevation data was collected along each cross section at maximum intervals of 1 m within
channels and 2 m on islands. Within those intervals additional data was collected where breaks in
slope occurred as to model the stream channel as accurately as possible. Additionally, elevation
data was collected at the thalweg and OHW in all years, and at all water surface heights along
the channel cross section in 2016-17.

Changes in channel cross section area were determined for each station by WY using
WinXSPRO, an interactive Windows® software package designed to analyze stream channel
cross section data for geometric, hydraulic, and sediment transport parameters (Hardy et al.
2005). The software allows the user to subdivide the channel cross section into multiple sub37

sections (Hardy et al. 2005), permitting the evaluation of three parameters; (1) bank erosion, (2)
streambed aggradation, and (3) streambed degradation and is comparable to the analysis done by
Cederholm (1972) investigating channel response associated with stream channelization at lower
BBC (Figure 12).

Bank Erosion

Streambed Aggradation

Streambed Degradation

Figure 12. Methodology for determining bank erosion, streambed aggradation, and streambed degradation on plots of channel
cross section from lower BBC, WY's 2014-17.

Vertical Thalweg Profile
I used thalweg elevations from stream channel cross sections and upstream distance as
derived from the cumulative distance (33m [stations 3-50] or 30m [stations 51-66]) to represent
the profile of the channel through my study reach. These data were divided to sub-reaches 1-3
(1-4 in WY2017) and analyzed for absolute and net change in the vertical thalweg profile area

38

utilizing WinXSPRO software to again sub-divide by aggradation or degradation of the stream
bed along the thalweg producing values for both of these variables by WY. Together, these
observations offer estimates of both absolute and net change to the channel thalweg profile

Table 6. Description of four sub-reaches comprising the 2km study reach at lower Big Beef Creek 2013-17.

Sub-Reach
1

Confinement
Moderate to none

2

Highly confined until roadberm removal in 2016 left
this reach perched and
unconfined

3

Moderate to high

4

High

Description
Stations 3-18, sub-reach 1 largely comprises the channelized reach
studied by Cederholm (1972). The WDFW weir is located about
midway between stations 3 and 4. The channel has migrated in the
upper end of the reach since the Cederholm (1972) study. Berms
left from channelization and created naturally by stream processes
confine most flows to the channel, however inflow to both RB and
LB wetlands was observed over the study period.
Stations 19-33, sub-reach 2 is characterized by road-berm
confinement and the presence of both RB and LB side channels
associated with the main channel. A LB overflow channel/beaver
pond complex is also present that maintains streamflow yearround. Rip-rap had been used to harden banks in the past. A water
intake structure was left in place after road berm removal and
probably continues to harden the bank locally. The avulsion into
the historic channel occurred within this reach. Rip-rap bank
hardening was left along the RB of the channel post-project at and
near station 33.
Stations 34-50, sub-reach 3 is characterized by a LB side channel
and an almost alluvial fan appearance as these channels on either
side of the mainstem lay at lower elevation. A RB overflow
channel is also present that maintains groundwater flow yearround. The upper end of this sub-reach becomes highly confined
by an alluvial or debris flow fan that was deposited in the
mainstem from the first RB tributary (travelling upstream). The
stream gaging station is located within this highly-confined
section.
Stations 51-66, sub-reach 4 was added in 2016 to accommodate
additional wood placement associated with phase 3 of the lower
Big Beef Creek restoration treatments. This sub-reach continues
upstream along the alluvial/debris fan deposited to the valley floor
along with the mouth of the tributary that provided the materials.
Further upstream high/easily erodible terraces (probably formed
when the channel was dammed by the debris flow fan [see
Hoffman and Gabet 2007]) combined with valley walls confine the
channel. Increased amounts of natural wood occur within this subreach.

39

This method assumes that the channel banks stay at a constant elevation and therefore might
underestimate change within reaches that included berm or road removal along the channel edge.
Sub-reaches were chosen because of their nearness to the weir, channel complexity, artificial
confinement by the floodplain road berm, and completeness of the dataset in the case of subreach 4 where surveys began in 2016 rather than 2013 (Table 6).

Physical Habitat Survey
Individual habitat units were categorized and measured (by a single observer) beginning
at the weir and continuing upstream about 1580 m in 2015 and 2060 m in 2016-2017 during latesummer low streamflow conditions. This effort included all available aquatic habitat from
valley-wall to valley-wall. Stream-type habitats were classified using a modified version of the
system offered by Bisson et al. (1982) that further typed pools within secondary channels (sidechannels) along with including other habitat types omitted by this classification scheme but
identifiable in the field (Table 7). These additional habitat types included (1) dry channels, (2)
isolated pools, and (3) within-channel beaver ponds.

Physical habitat units were measured for surface area with a Laser Technology Inc.
Impulse® laser rangefinder to the nearest 0.01 m. Length was measured in an upstream direction
and three width measurements were taken perpendicular to that axis. Maximum depth of
slow/deep habitats (pools) was collected in study years 2016-2017 utilizing a stadia rod
graduated to the 0.005 m and rounded to the nearest 0.01 m.

40

Table 7. Habitat classification scheme modified from Bisson et al. (1982). *Because pools were further classified in side
channels, secondary channel pools are included here as reference only.

Category
Slow/deep

Fast/
shallow

Other

Habitat Type
Lateral Scour Pool

Code
PL

Plunge Pool
Impounded Pool

PP
PD

Backwater Pool

PB

Trench Pool

PT

*Secondary Channel
Pool
Beaver Pond
Isolated Pool

PS

Glide

GL

Riffle

RI

Rapid

RA

Cascade

CA

Dry

DR

BP
PI

Description
Where pool scour is caused by boulders, wood, or changes in
channel direction
Where pool scour is caused by vertically dropping water
A pool area created by some sort of dam (includes debris dams,
boulders, etc.)
A pool area that is disconnected from the main flow of the
channel behind large obstructions such as rootwads or boulders
A pool formed by bedrock or other hardened control (bathtub
like), uniform flow
Any pool in a side-channel or braid
Within channel beaver pond, late summer/early fall
Depression within the channel substrate that contains water but is
separated from the streamflow
Smooth surface, moderately shallow and uniform depth, cannot
occur directly downstream of a pool
Shallow, moderate velocity, moderate turbulence, ≤ 4% gradient,
substrate (2-256 mm)
> 4% gradient, swift flow, considerably turbulent, generally
coarser substrate with boulders protruding through the surface at
low flow
Where shallow flow runs down a angled bedrock face or areas of
uneven gradient consisting of a series of alternating small falls
and shallow pools, typical substrate is bedrock, but may occur
among boulders and debris dams
Dry channel

Statistical Analysis

Repeated measures ANOVA was used to compare pool area and maximum depth among
channels, between WYs, and by wood placement (for pool area) following procedures outlined
by Mangiafico (2016) using R programming language (R Core Team 2018). An identical process
was carried out for non-pool habitat area. A post hoc Tukey’s test was completed for each
ANOVA to detect between group effects. Ecological data are rarely normally distributed
(Studinski et al. 2012), and the data collected by this project were no different. Since skewness in
the data was always in one direction, I stayed with the ANOVA tests. As a collection of t-tests,
41

which is not at all sensitive to this assumption if the distribution of two groups are skewed the
same (McDonald 2014), ANOVA provided results that were consistent with my extensive field
observations of the site.

Results
Floodplain Habitat
Pond area (mostly beaver ponds impounded by dams) totaled about 53,000 m2 in 2017
after restoration treatments were completed and winter had passed. This value represents a 25%
increase since last measured in 2015 prior to treatment (Table 8). The whole of these habitats
became accessible to fish (visually inspected) after restoration treatments were complete, a 95%
increase in access over the 2015 condition.

Total channel length increased incrementally after restoration treatments and obtained a
maximum (including where the channel flows through ponds) of 4713m in 2017, a 43% increase
over background conditions (2013-15; Table 8).

Table 8. Total pond/wetland area and total channel length at lower BBC (1990, 2013-17). The value in parenthesis represents
the percent change over the previous survey period. No ponds were observed on aerial photographs pre-dating 1990.

Year
Pre-Treatment
1990
2013
2015
Post-Treatment
2016
2017

Total Pond Area
(m2)

Accessible Pond Area
(m2)

Total Channel Length
(m)

9102 (1.00)
27,119 (1.98)
42,783 (0.58)

9102 (1.00)
20,924 (1.30)
27,277 (0.30)

NA
3296 (NA)
3296 (0.00)

NA
53,266 (0.25)

NA
53,266 (0.95)

3813 (0.16)
4713 (0.24)

42

The plan view of the channel did not change measurably from 2013 through 2015
(Figures 13A-D). Overall, changes to the channel occurred after wood placement, but in
combination with higher peak Q’s and increased sediment delivery from upstream than were
noted during the pre-treatment phase of this project. Changes occurred in 2016, one winter after
phase 1 wood was placed in the channel during the summer of 2015. Net aggradation of the main
channel from station 28 upstream to station 37 contributed to a partial LB channel avulsion near
station 34. Additionally, and contributing to the main channel aggradation, bank erosion around
wood structures that were placed between stations 29 and 30 redirected the channel thalweg into
an existing RB side-channel where it remained for the duration of the study. The redirection of
the channel thalweg, and thus the main path of water flow, left the main channel reach dry during
the low water season from about station 26.25 to station 29.25 (Figures 13 C and D). The left
bank side channel intersected by stations 21-25 was also dry or limited to isolated pools of water
during the post-project low-flow season.

During WY2017 the channel avulsed in five additional locations (Figure 13D). Most
importantly, after removal of the floodplain road berm, a potentially channel-capturing avulsion
occurred into the pre-development channel. Big Beef Creek had previously avulsed at this same
location during WY’s 1999 and 2007; repairs to the road were made both times. This channel
(floodplain avulsion channel) became the primary flow channel during summer low-flow
conditions of WY2017 from the point of avulsion to the mouth of the stream. The new flow-path
extended across the newly connected floodplain intersecting two beaver ponds (partially
destroying the uppermost beaver dam, ‘C’ on Figure 13A) near the right valley-wall before
43

continuing through the newly created wetland and along the weir access road where it intersected
another series of large beaver ponds (B; Figure 13A). Active erosion was noted along the weir
access road through the summer of 2017 as the dam containing the bulk of beaver pond B was
raised (by the beaver) and the water height elevated.

Wood structures that were placed within the channel during 2016 appear to have directly
contributed to three of the five WY2017 avulsions by retaining sediment within the main channel
(creating a mid-channel bar) and thus directing flow toward channel banks that consisted of finer
grained materials than the channel bed. The channel pattern at lower BBC changed from what
was largely a single thread meandering channel (albeit constructed and maintained) to a braided
channel pattern as a post-treatment condition (Figure 13D).

44

Weir

Weir Access
Road and
Building
Footprints

A

Floodplain
buildings
and fill

Beaver Ponds
B
C

Floodplain roadberm

Main Channel (light blue)

Summer low
wetted channels
(highlighted red)

Figure 13A. The lower 2 km of the BBC channel during years 2013-2014. Channel lines that are highlighted in red were wetted
during the time of survey. Sub-reaches 1-4 are defined by the three solid block lines set perpendicular to the channel line along
with the ends of the depicted channel.

45

Figure 13B. The lower 2 km of the BBC channel during 2015. Note that while the channel configuration did not change, the
surface area of beaver ponds increased since last surveyed in 2013.

46

Floodplain
buildings
removed

Phase 1 wood
placement

Figure 13C. Plan view of the lower two kilometers of the BBC Channel as mapped in 2016.

47

Figure 13D. The lower 2km of the BBC channel in 2017 after phase 1 and 2 wood treatments, building demolition, and the
removal of the floodplain road and associated fill materials.

48

Channel Cross Sections
Stream channel cross-sectional surveys of Big Beef Creek were conducted by previous
research in 1969-77 (Cederholm 1972; Madej 1978, 1982)) and in 2014-2017 for this study
(Table 9). Sediment sources (bank erosion, streambed degradation, and upstream) are reported
along with their percent contribution to the total amount deposited within a given reach. The
control reach from previous studies is equal to sub-reach 3. Changes in channel alignment and
the lack of a station downstream of the weir prompted me to break out the lowest sub-reach
differently than the channelized reach in previous surveys. Therefore, because reach lengths
vary, the total amount of sediment deposited within a reach was further expressed as volume/m-1
(m3/m) for comparison (Madej 1978; Table 9). Results within this sub-section will refer back to
this table.

Since severe bank erosion or streambed degradation may mask the amount of aggradation
at other stations, individual cross sections should be studied as well (see Appendix A; Madej
1978). For all cross sections (2013-2017) the view is looking upstream (also see summary tables
of data presented as figures in this section in Appendix C).

Over the entire reach, all variables (bank erosion, streambed degradation, sediment from
upstream reach, total sediment deposited during the reach, and volume of sediment per linear
meter of stream) peaked in their value during 2016—this observation taking the late addition of
sub-reach 4 into consideration. At sub-reach 1, the high value of streambed degradation in WY
2014 is explained by sediment management activities around the weir. Similarly, Madej (1978)
49

reported somewhat anomalous measures at the channelized reach during 1977 under the same
circumstances.

Table 9. Sources of sediment deposited by reach (year), sub-reach, and historic observations using the cross sectional survey
technique first described by Cederholm (1972) at lower BBC main channel, WY’s 1970-71, 1976-77, and 2014-2017 (adapted
from Cederholm 1972; Madej 1978). Note that sub-reach 4 is included in the 2017 result.

Erosion (m3)

Sediment Sources
Volume (%)
Degradation (m3)

Upstream (m3)

2014

132 (0.05)

2511.3 (0.95)

1

62.7 (0.04)

2

Sub-Reach

0.0 (0)

Total deposited
(m3)
2643.3

Total
m3/m
1.28

1603.8 (0.96)

0.0 (0)

1666.5

3.37

42.9 (0.10)

237.6 (0.55)

148.5 (0.35)

429.0

0.88

3

26.4 (0.04)

669.9 (0.96)

0.0 (0)

696.3

1.32

2015

273.9 (0.13)

1838.4 (0.87)

0.0 (0)

2112.3

1.03

1

72.6 (0.07)

798.6 (0.76)

184.8 (0.18)

1056.0

2.13

2

155.1 (0.22)

548.1 (0.78)

0.0 (0)

703.2

1.44

3

46.2 (0.07)

491.7 (0.79)

85.8 (0.14)

623.7

1.18

2016

1038.0 (0.27)

2730.6 (0.71)

80.1 (0.02)

3848.7

1.87

1

660.0 (0.34)

1257.3 (0.66)

0.0 (0)

1917.3

3.87

2

315.3 (0.24)

767.1 (0.58)

241.8 (0.18)

1324.2

2.71

3

62.7 (0.05)

706.2 (0.57)

468.6 (0.38)

1237.5

2.34

2017

1308.6 (0.29)

3203.7 (0.71)

0.0 (0)

4512.3

2.19

1

293.7 (0.19)

1254 (0.81)

0.0 (0)

1547.7

3.13

2

49.5 (0.06)

738.9 (0.94)

0.0 (0)

788.4

1.61

3

554.4 (0.36)

745.8 (0.49)

221.1 (0.15)

1521.3

2.88

4

411.0 (0.21)

465.0 (0.24)

1047.0 (0.54)

1923.0

3.50

1

920 (0.50)

734 (0.40)

177 (0.10)

1831

3.08

1181 (0.32)

152 (0.04)

2398 (0.64)

3731

6.28

210 (0.20)

139 (0.13)

715 (0.67)

1064

2

Channelized
1971-76
2
Channelized
1977
2
Control 1971-76

NA

NA

NA

2438

4.40

NA

NA

NA

-36

-0.07

NA

NA

NA

864

1.70

2

NA

NA

NA

-429

-0.86

Channelized
1970
1
Channelized
1971
1
Control 1971
2

Control 1977

1

Reported by (Cederholm 1972).

2

Reported by (Madej 1978).

1.92

50

Bank erosion contributed more to sediment deposition (aggradation) in the post-project
phase (Figure 14), this excepting sub-reach 2 where bank erosion contributed 22% of the
deposited sediment during WY2015, before any work had been done. Bank erosion occurred
primarily within the main channel at sub-reaches 1, 3, and 4. Overall, bank erosion contributed
less to sediment deposited within the study reach than was noted in previous surveys.

Figure 14. Pre- and post-restoration plots of mean bank erosion (m2) at lower BBC during WY’s 2014-17. Panel A represents the
interactions of treatment (wood placement), WY, and channel type on the response variable. Panel B represents the interactions
of treatment, WY, and sub-reach on the response variable. Error bars = 0.95 CI.

Streambed degradation contributed less to sediment deposits as time passed (study years)
within sub-reach 3 (despite very little change in mean value, Figure 15) but remained variable
51

within the other sub-reaches. Streambed degradation explained 81% of the sediment deposited in
that reach in 2017, the highest contribution observed without manipulation (sediment removal
around the weir). Overall, streambed degradation contributed more to deposited sediment than
observed in previous studies. Mean values of streambed degradation were elevated in side
channels (reflected mostly in the RB side channel in sub-reach 2; Figure 15). Mean streambed
degradation did not change very much in the main channel after wood placement, however
increased variability in this metric is notable in sub-reach 1 post-treatment (Figure 15).

Figure 15. Pre- and post-restoration plots of streambed degradation (m2) at lower BBC during WY’s 2014-17. Panel A
represents the interactions of treatment (wood placement), WY, and channel type on the response variable. Panel B represents
the interactions of treatment, WY, and sub-reach on the response variable. Error bars = 0.95 CI.

52

Overall, the amount of sediment contributed from upstream sources was not very
important at the reach scale, only contributing 0.02% of the total deposits in WY2016. However,
at the sub-reach scale upstream sources became more important, contributing to sediment
deposited sub-reaches 2, 3 and 4 during WY’s 2016-17. Upstream sources contributed 54% of
the sediment deposited in sub-reach 4 during WY2017. This value is second only to that
recorded at the recently channelized section in 1971.

Figure 16. Pre- and post-restoration plots of streambed aggradation (m2) at lower BBC during WY’s 2014-17. Panel A
represents the interactions of treatment (wood placement), WY, and channel type on the response variable. Panel B represents
the interactions of treatment, WY, and sub-reach on the response variable. Error bars = 0.95 CI.

Within the main channel, mean bank erosion increased 366.7% over the reach with the
highest mean values measured within sub-reach 1 (Figure 14). Mean streambed aggradation also
increased (87.4%) at the reach scale (Figure 16). Increases in mean streambed aggradation are
53

also notable within sub-reaches 2 and 3 (Figure 16). Mean absolute change to cross section area
was nearly doubled in the post-treatment phase (Figure 17). Mean net change to cross section
area declined after wood placement, becoming net depositional by WY2017 (Figure 17). The
reach scale mean width/depth ratio trended upward after wood placement—this trend also
notable in sub-reach 3 (Figure 18). Mean thalweg gradient did not change over the study period,
although the variability of these data appeared to respond to wood placement at the sub-reach
scale (Figure 19).

Figure 17. Pre- and post-restoration plots of mean net change (m2, panels A, B) and mean absolute change (m2, panels C, D) at
lower BBC during WY’s 2014-17. Panels A and C represent the interactions of treatment (wood placement), WY, and channel
type on the response variables. Panels C and D represent the interactions of treatment, WY, and sub-reach on the response
variables. Error bars = 0.95 CI.

54

Figure 18. Pre- and post-restoration plots of bankfull width/depth ratio (w.d) at lower BBC during WY’s 2014-17. Panel A
represents the interactions of treatment (wood placement), WY, and channel type on the response variable. Panel B represents
the interactions of treatment, WY, and sub-reach on the response variable. Error bars = 0.95 CI.

Within side channels, mean absolute change to channel cross section area and mean
streambed degradation trended upward at the reach scale in the post-treatment phase of the study
(Figures 15 and 17). Mean net change to channel cross section area, mean bank erosion, and
mean streambed aggradation did not change from the pre-treatment condition (Figures 14, 16,
17). However increased variability in net change measures was detected in sub-reach 2 during
WY2016 (Figure 17).

55

Figure 19. Pre- and post-restoration plots of thalweg gradient at lower BBC during WY’s 2014-17. Panel A represents the
interactions of treatment (wood placement), WY, and channel type on the response variable. Panel B represents the interactions
of treatment, WY, and sub-reach on the response variable. Error bars = 0.95 CI.

Change in channel cross section area was affected due to management activities at
stations 3 and 4 during water year 2014 when about 535m3 sediment was excavated from around
the weir. The resulting knickpoint in the streambed facilitated positive change in channel crosssection area for some distance upstream of the weir during WY2014-15 (Figures 20-21). As this
knickpoint moved upstream, areas above and below the weir (stations 3 and 4) aggraded in
response indicating that streambed sediments were freely moving through or over the weir
pickets during times of high stream discharge (Figures 20-21).

56

Figure 20. Summary of change to stream channel cross section area via bank erosion (blue), streambed degradation (green,) and
streambed aggradation (red) at the lower BBC main channel during WY's 2014-17.

Figure 21. Summary of Net change in cross-sectional area of the main channel (and 3 side channels) at lower BBC, WY’s 20142017. Red = Net streambed aggradation (negative values), Blue = Net streambed degradation/bank erosion combined
(positive values).

57

Notable channel aggradation occurred at stations 27-40 during WY2016, however most
of this reach became net degradational during the following WY (Figures 20-21). Bank erosion
at stations 18 and 44 was associated with wood placement at or near these locations (Figure 21).
Similarly, streambed degradation (resulting in net change) at stations 16 and 48, was directly
associated with wood placement (Figures 20-21).

Thalweg Profile
Mean vertical thalweg profile area (MVTPA) did not change over the reach after wood
treatments when measured in terms of either absolute or net values (Figure 22). However,
increased variability around these metrics was evident within sub-reach 2 (Figure 22).
Furthermore, mean net change to the vertical thalweg profile area appears to be trending
downward—the channel becoming more depositional in nature (Figure 22). Notable increases in
thalweg profile aggradation appear post-project (Figure 23). Plots of data used to generate these
results are provided within Appendix B of this document.

58

Figure 22. Pre- and post-restoration plots of mean net change (m2, panels A, B) and mean absolute change (m2, panels C, D) to
the vertical thalweg profile area at lower BBC during WY’s 2014-17. Panels A and C represent the interactions of treatment
(wood placement), WY, and channel type on the response variables. Panels C and D represent the interactions of treatment, WY,
and sub-reach on the response variables. Error bars = 0.95 CI.

Summary plots of changes to the main channel thalweg (by year and sub-reach) is
provided in Figure (24 A-D). A general discussion of each, including a general description of
wood placement is provided with each.

59

Figure 23. Pre- and post-restoration plots of mean streambed aggradation (m2, panels A, B) and mean streambed degradation
(m2, panels C, D) to the vertical thalweg profile area at lower BBC during WY’s 2014-17. Panels A and C represent the
interactions of treatment (wood placement), WY, and channel type on the response variables. Panels C and D represent the
interactions of treatment, WY, and sub-reach on the response variables. Error bars = 0.95 CI.

60

Figure 24A. Changes in the thalweg profile of sub-reach 1 (stations 3-18) at lower BBC, 2013-2017. The location and elevation
of the weir is indicated by the vertical dashed line. The observable decrease in thalweg elevation at 330m (station 13) was
associated with a large/deep pool created when a buried log re-emerged from the channel bed. Phase 2 wood structures were
placed within the uppermost portion of this reach (≥ 429m) in 2016.

Figure 24B. Changes in the thalweg profile of sub-reach 2 (stations 19-33) at lower BBC, 2013-2017. Phase-one wood structures
occurred from 594-924m (stations 21-31) in 2015 and contributed to streambed degradation in the lower half of the sub-reach
and aggradation of bed materials in the upper half of the reach during WY2016. Some of the aggraded material was dispersed
downstream during WY2017.

61

Figure 24C. Changes in thalweg profile of Reach 3 (stations 34-50) at lower BBC, 2013-2017. Phase 2 wood structures were
placed throughout this sub-reach in 2016. Noteworthy decrease in thalweg elevation occurred at 1512m (station 48) in response
to a structure placed on that cross section.

Figure 24D. Changes in the thalweg profile of sub-reach 4 (stations 51-66) at lower BBC, 2016-2017. Phase 2 wood structures
were placed within this reach up to 1728m in 2016. Noteworthy within this thalweg profile is the apparent aggradation of the
streambed while retaining much of its original shape (as plotted).

62

Physical Habitat

The total count of channel-type habitat units varied yearly (in part due to changes in
survey length in 2016) but ultimately increased to a maximum of 343 measured in 2017 (Table
10). Pool counts increased similarly, except for backwater pools (PB) that declined by 45% over
2015 observations (Table 10). Percent pool increased in 2017 after restoration treatments were
complete and a winter had passed (Table 10). Four times as many dry channel units were
measured in 2016-17 than were in 2015 (Table 10).

Table 10. Count of physical habitat units by year, treatment and channel type at lower BBC, 2015-17. The 2015 survey extends
from the WDFW weir to station 50, 2016-17 surveys were extended further upstream to station 66.

Habitat Units →
2015
Pre-Treatment
main.channel
side.channel
2016
Pre-Treatment
main.channel
side.channel
Post-Treatment
main.channel
side.channel
2017
Post-Treatment
main.channel
side.channel

#
Total
320
320
200
120
294
148
104
44
146
37
109
343
343
178
165

#
PL
118
118
80
38
110
60
43
17
50
17
33
137
137
69
68

#
PD
2
2
2
0
2
2
1
1
0
0
0
5
5
1
4

#
PB
20
20
17
3
10
7
7
3
0
3
11
11
6
5

#
PI
11
11
5
6
21
8
5
3
13
0
13
21
21
14
7

#
PP
1
1
1
0
0
0
0
0
0
0
0
5
5
1
4

#
BP
4
4
0
4
1
1
1
0
0
0
0
3
3
3
0

#
RI
141
141
88
53
112
57
41
16
55
17
38
132
132
71
61

#
GL
18
18
7
11
17
6
4
2
11
1
10
8
8
4
4

#
CA
0
0
0
0
0
0
0
0
0
0
0
1
1
0
1

#
DR
5
5
0
5
21
7
2
5
14
2
12
20
20
9
11

%
pool
0.49
0.49
0.53
0.43
0.49
0.53
0.55
0.48
0.45
0.46
0.45
0.53
0.53
0.53
0.53

63

The count of habitat units directly associated with placed wood increased sequentially—
along with the phases of the project—totaling 51 by the end of observations in 2017
(2.1/structure; Table 11). Pools increased in number and diversity of type at placed wood
structures, although the number of pools decreased at phase 1 structures reflecting the loss of
wetted habitat (at low flow) around some of these structures in their first year (Table 11).
Additionally, 33% of isolated pools observed in 2017 were directly associated with placed wood
structures (Tables 10-11). Percent pool increased similarly up to 67% at last observation (Table
11).

Table 11. Count of physical habitat units directly associated with wood treatments by year, treatment and channel type at lower
BBC, 2015-17. The 2015 survey extends from the WDFW weir to station 50, 2016-17 surveys were extended further upstream to
station 66.

#
Total
19

#
PL
11

#
PB
0

#
PI
0

#
RI
8

#
DR
0

%
pool
0.58

19

11

0

0

8

0

0.58

main.channel

14

9

0

0

5

0

0.64

side.channel

5

2

0

0

3

0

0.40

38

20

3

1

12

2

0.63

25

12

3

1

8

1

0.64

25

12

3

1

8

1

0.64

Habitat Units →
2015
Pre-treatment

2016
Pre-treatment
main.channel
Post-treatment

13

8

0

0

4

1

0.62

main.channel

11

6

0

0

4

1

0.55

side.channel

2

2

0

0

0

0

1.00

51

25

2

7

9

8

0.67

2017
Post-treatment

51

25

2

7

9

8

0.67

main.channel

45

20

1

7

9

8

0.62

side.channel

6

5

1

0

0

0

1.00

64

Figure 25. Interaction plots of the effect of the number of bankfull days (NumDays), engineered log jam (ELJ) yes or no, and
channel type on habitat unit area at lower BBC, WY’s 2015-17. Panels A and B display the interaction of these variables on pool
area while panels C and D represent non-pool habitats. Error bars = 0.95 CI.

There was a statistically significant interaction between the effects of channel type and
the number of bankfull days on pool area (Chisq2 = 6.36, p < 0.05). In the main channel, pool
area differed at 4 and 22 days of bankfull flow where no wood was placed (Tukey’s post hoc
test, p < 0.05) but there is no evidence that pool area was different in side channels or at pools
that received wood. Pool area was on average 138 m2 greater at main channels that did not
receive wood at 22 days of bankfull flow than those measured after 4 days of bankfull flow
(Figure 25). The area of non-pool habitat units responded negatively to the number of bankfull
days (Chisq1 = 6.36, p < 0.05) and channel type (Chisq1 = 9.38, p < 0.001) becoming very small
in the main channel by the end of the study (NumDays = 8, Figure 25).

65

Figure 26. Interaction plots of the effect of channel type, number of bankfull days (Numdays), and engineered log jam (ELJ) yes
or no on maximum pool depth at lower BBC, WY’s 2016-17. Error bars = 0.95 CI.

There was a statistically significant interaction between the effects of channel type and
the number of bankfull days on maximum pool depth (F1, 318 = 2.97, p < 0.10; Figure 26).
Maximum pool depth was greater in the main channel (regardless of wood placement) at 22 days
of bankfull flow (Tukey’s post hoc test, p < 0.05; Figure 26). In side channels, pools were
shallower than main channel pools—and side channel pools that received wood structures (p <
0.05; Figure 26). Main channel pools were deeper (regardless of wood placement) after 22 days
of bankfull flow than any other grouping observed (p < 0.05; Figure 26).

66

Discussion
The change in the lower BBC channel from what is best described as a forced single
thread meander (with minor braiding) to the braided configuration that developed during
WY2017 (Figures 13 A-D) is reflective of the conditions documented by Cederholm (1972) prior
to channelization (Figure 27). Described as a braided channel that was highly aggraded with
bedload sediment, dogs associated with the research station were observed to harass and kill
salmon in the small shallow channels (Cederholm 1972). Predation on ESA-listed (threatened)
summer Chum Salmon by American River Otter (Lutra canadensis) at BBC was noted multiple
times in 2017, a lack of available spawning area above the weir caused fish to linger in the pool
below it (due to split nature of the 2017 channel) contributing to these observations. At nearby
Little Anderson Creek, similar channel conditions to those at lower BBC (current) contributed to
heavy losses of Coho Salmon to River Otter predation over several spawning seasons (WDFW,
unpublished data).
Suggesting that the recently constructed dam was starving the lower channel of sediment,
Cederholm (1972) pointed to erosion of downstream (of the dam) glacial-age terraces as a major
source for sediment that was impacting the channel (causing braiding) prior to channelization.
Similarly, Madej (1978, 1982) suggested that forestry practices (including roadbuilding/ditching)
were affecting the lower creek channel with an increased sediment load leading to a
widening/shallowing channel condition. Observations made by these authors remains important
in the understanding of how BBC (and other streams with a similar morphology) respond to
perturbation.

67

Figure 27. Channel configurations before and after channelization at lower Big Beef Creek, 1969-71 (from Cederholm 1972).
Flow direction is from top of image to bottom of image. Stations 4-21 from this study coincide with those (1-18) depicted in this
image.

Modern catchment-based thought might also link the channel braiding experienced in
1969 to: (1) the diking of the channel from its historic location, (2) the subsequent capture (by
the stream separated from its channel) of blind tidal channels that existed on the landscape, (3)
bed de-stabilization from channelization, and (4) additional upstream dam
construction/channelization effects on highly erodible adjacent slopes.
68

While stream channelization is not typically considered a stream/salmon recovery action
today (Roni et al. 2002, 2008; Beechie et al. 2008), the observations made by Cederholm (1972)
allow for comparison of the historic BBC physical channel (and its function) with that of the preand post-restoration channel documented by this study (Table 9). Work done in WY’s 1970-71
suggested that bank erosion and streambed aggradation with material from upstream reaches was
more important in the lower BBC channel than in modern times. This observation might be best
explained by the combination of four factors: (1) additional storage capacity/sediment delivery
from side channels, (2) wood removal from the stream channel as part of the channelization
process, and the modern recruitment of wood through natural and artificial means, (3) the growth
of riparian vegetation along the channel edge (Cederholm 1972), and (4) the presence of North
American Beaver (Castor canadensis) on the floodplain.

My observations of sediment sources might differ from those of Cederholm (1972)
because of additional storage and input capacity that side channels offer to the main channel
where my efforts were focused. However, I am unable to make estimates of sediment volume
from the relatively few and haphazardly placed side channel cross sections included in my work
and cannot adequately answer this question. Measurable amounts of sediment were delivered
overbank during WY2017 along the RB side channel in sub-reach 2, while more was deposited
in the new ‘floodplain avulsion channel’ and the upper extent of beaver pond C (Figure 13A).
Stream channel cross sections should include all of the streambed and streambank that might be
influenced by management actions (Olson-Rutz and Marlow 1992), the valley-wide nature of the
results of this restoration project are not completely addressed by my primary effort to study the
effect of wood placement on the channel. Since about 87% of the structures were placed within
69

the main channel my efforts were focused there. Floodplain mapping however, did address the
addition of newly accessible and created habitats at lower BBC.

Second, the lack of wood encountered by Cederholm (1972) might partly explain the
differences in our findings. Much is known about the role of wood in streams and rivers, both
naturally (Bilby and Ward 1991; Gurnell et al. 2002; Abbe et al. 2003; Curran 2010) and
artificially introduced (Larson 2000; Larson et al. 2001; Kail et al. 2007; Roni et al. 2015) to the
system. Sediment retention around logs that have made their way into the stream channel is
important to Puget Sound Lowland streams like BBC (Booth et al. 2003; Stillwater Sciences
2008a, 2008b). Large Western Red Cedar stumps still standing within my study area lay
testimony to the volume of sediment once retained by wood within these systems. Utilizing the
equation for the volume of a wedge;
𝑉 = 𝑏ℎ/6(2𝑎 + 𝑐)
Where:
V = Volume
a = The width at the base side of the wedge = 10
b = The depth of the wedge at the wide end = 0.3 or 0.8
c = The width at the toe of the wedge = 1
h = Length of the wedge = 50

70

it is easy to imagine a vast change in the sediment retention characteristics of the BBC
catchment. Imagining a log laying across the channel, perpendicular to flow, and utilizing the
above equation with the hypothetical values listed on the right of the variable definitions; a log
with a width value of 0.80 m would store some 140 m3 of sediment upstream of it. A log with a
with value of 0.30 m would only store 52.5 m3 (62.5%↓) of sediment upstream of it suggesting a
large loss of storage capacity catchment-wide with a change in available log size. Unfortunately,
the historic/current mean log diameter at BBC remains unknown, so estimates of the loss of
sediment storage capacity based on the size of wood in the basin are impossible. These musings
on sediment storage ignore the downstream storage capacity of wood in streams/rivers, and thus
further limit their value. Both downstream and upstream accumulations of gravel were common
at wood structures placed within BBC during 2015-16.

The upstream storage of sediment by wood structures placed in the BBC channel
contributed to mid-channel bar development, bank erosion, and channel avulsions. The formation
of mid-channel bars act to increase velocity and shear stress thus increasing the erosional attack
along the banks of a stream (Madej 1978, 1982; Leopold et al. 1992). Shear stress, an erosional
process driven by gravity (Leopold et al. 1992);
𝜏 = 𝛾𝐷𝑆𝑤
Where:
τ = Shear Stress (N/m2, )
γ = Weight Density of Water (N/m3, lb/ft )

71

D = Average water depth (m, ft)
Sw = Water Surface slope (m/m, ft/ft)

is affected by a localized increase in water surface slope around the mid-channel bar as it begins
to back up water (creating head) in the channel, the re-direction of water around the bar
contributes to the phenomena. As a result, water depth is increased along the banks as the midchannel bar forms and causes shallowing in the center channel (a hump shape in a channel cross
section). Increases in either variable would likewise increase the value of shear stress along the
bank, and thus amplify erosional forces on the streambed flanking the mid-channel bar, the
banks, or both (Leopold et al. 1992) and the sediment transport capacity of the channel (Madej
1978, 1982).

Many of the wood structures placed in the BBC channel during phase 2 of the project
were channel-spanning, consisting of a sequence of ballast logs placed over a ‘slash bundle’ of
smaller diameter logs roped together and situated near-perpendicular to the channel banks
(ENTRIX 2010; PRISM 2018). These structures captured sediment effectively while maintaining
pools (at wetted locations) 100% of the time in 2017. Despite the obvious sediment retention
at/near these structures (increased streambed aggradation and bank erosion post-treatment),
streambed degradation continued to explain most of the sediment delivered to reaches throughout
the study period. This observation does not agree with the findings of Cederholm (1972), where
bank erosion and upstream sources were more important to deposition within the sub-reach.

72

Wood in the stream channel (both naturally and artificially added) might be influencing
coarse sediment movement through streambed scour and transport on high winter flows. Along
with its sediment storage capabilities, wood in streams can cause scour of the streambed and
contribute to the development of pool habitats (Bilby and Ward 1991; Leopold et al. 1992;
Larson et al. 2001; Buffington et al. 2002; Abbe et al. 2003; Roni et al. 2015). The decline of
mean non-pool habitat area measured by this study might signal an increase in streambed scour
(and coarse sediment mobility via lack of storage in riffle habitats) after wood additions at BBC.
Reporting an increased sediment yield, changes to the channel, and a resultant increase in
sediment transport due to logging of second-growth forests in the BBC catchment, Madej (1978,
1982) indicates that channel reaches that were adjacent to logging contained 4.8 times more
wood jams than those that didn’t. Unfortunately, her discussion focused on mineral-type
sediment mobility rather than that of wood, citing only the impermanent nature of wood jams as
sediment traps for bed material moving downstream (Madej 1978, 1982).

Observations of changes in channel morphology due to the direct felling of trees into
eight West Virginia streams noted greater instability of streambed features after wood addition
(Studinski et al. 2012). While wood additions increased habitat complexity, these authors
reported no increase in net pool area with wood addition as pools were both created and
destroyed at a higher rate due to bed instability attributed to the wood placement (Studinski et al.
2012). Increased bed instability due to the addition of wood at BBC might—in part—explain
differences in bedload movement between this and historic studies at BBC. These observations
further suggest that early assessment of stream channel restoration projects might be biased
toward the study of ecological disturbance, rather the intended goals of the project. However,
73

trapped sediment, resulting in bank erosion and channel avulsions coupled with increasing dry
and isolated habitats associated with structures placed within BBC suggest that future measures
of the wetted channel will be well away from the locations of wood placement.

Moreover, an investigation into the changes in the size and quantity of wood in Olympic
Peninsula streams due to logging activities found that: (1) the initial depletion of old-growth
wood from streams where old-growth riparian forest was removed was very rapid, (2) a
secondary stage of slower depletion of wood associated with catchment destabilization followed,
and that (3) wood inputs from second-growth forests up to 73 years old were characterized by
small diameter, high mobility, and a high decay rate (McHenry et al. 1998). The high mobility of
second-growth wood is an important observation relative to channel bed dynamics at BBC where
large quantities of sediment and second growth timber were delivered during the 2007 ‘channel
re-setting’ storm event (Stillwater Sciences 2008b; WDFW, unpublished data). My observations
of channel change at lower BBC match well with observations made higher in the watershed and
among neighboring IMW watersheds. These observations include: (1) complete filling of the
channel with sediment accompanied by lateral channel migration, (2) the exchange of coarse bed
sediment for finer (more erodible) sediments from the banks, (3) substantial recruitment of wood
through direct addition by the storm and later addition through channel migration and avulsion.

The third reason that my observation of sediment delivery to the channel might differ
from those of Cederholm (1972), is that the early development condition of the lower BBC
floodplain was less forested. Channelization of the creek and associated berm building furthered

74

this condition along the lower one kilometer of the channel (Cederholm 1972). Since then, the
construction of the fish-trap weir and other dikes near the mouth of the channel have elevated the
base-level of the stream and blocked tide water from reaching its historic upstream extent. A
forest of Alder (Alnus rubra) and sparsely located coniferous trees grew on site to be largely
drowned/felled by beaver by present time. However, trees remain along the banks at BBC, with
large beaver ponds covering the majority of the lower floodplain. As bank stability is known to
be strongly correlated with the roots of riparian vegetation (Beechie et al. 2006), the growth of
trees along the previously channelized reach at BBC probably accounts for the difference in
erosion volumes noted between this and previous studies. Even one-year-old alder saplings
might have contributed to bank stability in the second winter after channelization (Cederholm
1972). A considerable number of the streamside trees have begun entering the stream channel
(notably in sub-reach 1) where lateral migration of the channel is underway.

Finally, the damming of streams by beaver to increase suitability for their occupation can
cause modification of the landscape, giving them great significance as a geomorphic agent and
the title ‘ecosystem engineer’ (Pollock et al. 1995; Gurney and Lawton 1996; Gurnell 1998).
Consequently, their direct and significant control on ecosystem structure and dynamics has also
led to their consideration as a ‘keystone species’ (Naiman et al. 1988; Gurnell 1998). At least
five separate beaver lodges are located along the lower two km of BBC. Taking advantage of
valley-wall seeps, large beaver ponds were created in off channel areas protected from
floodwaters by berms and channelization (the first appearing on the left bank near the mouth of
the stream around 1990). Similarly, at neighboring IMW stream Little Anderson Creek, pond
creation through beaver damming has been commonplace over the past 15 years. However, lack
75

of protection from high stream discharge and bedload movement, has led to a relatively quicker
rate of construction and destruction of these habitats. Large ponds—like those at BBC—filled
entirely with sediment in less than 24 hours during the 2007 storm event, moving the creek
channel about 200 m from one valley wall to the other (WDFW, unpublished data). This
potential for rapid change of the stream channel complicates any prediction of future conditions
at lower BBC.

Bedload sediment is being delivered to the right bank series of beaver ponds and
eventually to the new wetland habitat that was created as part of this restoration project. While
the project goal of ‘reconnecting wetland habitat’ was met, the circumstance by which it was met
was twofold: (1) the removal of buildings and fill allowed connection of beaver ponds B and C
increasing upstream access to important pond habitats, and (2) the partial avulsion of the stream
into the ponds from sub-reach 2. Geomorphic assessment and early-phase design of this project
warned of the consequences (i.e., loss of habitat, damage to infrastructure) from this predictable
avulsion path, suggesting that restoration at this site should be a stop-gap measure while a more
long-term plan for the floodplain is put in place (ENTRIX 2010). Some floodplain restoration
projects set goals to increase channel migration and erosion (Abbe et al. 2002) suggesting that
evaluation of these results remain context dependent, and thus may be negative or positive
depending on the context and project goals (Roni et al. 2015). However, materials associated
with the lower BBC restoration—along with relatively general project goals—do not make clear
the goals of wood placement that were part of the project (PRISM 2018). My experience agrees
well with the published literature that calls for the setting of clear project goals (Jähnig et al.
2011; Morandi et al. 2014) and a continued need for direct, collaborative involvement between
76

scientists, managers, and practitioners to conduct meaningful project evaluations to forward
progress in the science and application of stream restoration (Bernhardt et al. 2007).

In examination of 787 restoration projects implemented within California’s Russian
River catchment since the1980’s, researchers revealed that stream restoration was primarily
limited to the ‘repair’ of streams and the re-routing of sediment at specific sites (Christian-Smith
and Merenlender 2010). The perceived importance of these pond habitats to salmon may be
short-lived at lower BBC. The presence of beaver, however, makes the prediction of outcomes at
this site difficult. During summer 2017, dam building activities caused a short-term avulsion of
nearly all available stream discharge into the experimental spawning channel. Within 10 days
another dam had been built that re-directed the flow once again. Additionally, saturation of the
weir road (a dike) by the increased pond levels led to low-flow bank erosion over about an 80 m
reach. Filling of the ponds at lower BBC with sediment would likely re-direct stream discharge
into the pre-existing channel as water levels over much of the floodplain are higher in elevation
that those in the channel at low summer flow. Channel degradation within sub-reach 1
(particularly downstream of the weir) suggests a decline in sediment delivery to the mouth of the
stream. For the first time in the 48 years since a weir has been in place at BBC, management
concerns have shifted to undercutting of the structure rather than burial.

The mixed results of my assessment of channel condition associated with the restoration
of lower BBC might illuminate the difficulty in evaluating such projects. A large increase in
accessible beaver pond habitat might be considered an improvement from existing conditions as

77

the importance of these habitats to Coho Salmon production is well known (Pollock et al. 2004).
However, the filling of those ponds with sediment via channel avulsion may lead to a lack of
those habitats as a future condition. Apparent instability of the channel associated with wood
placement and sediment delivery from upstream complicates any prediction of future outcomes.
A large influx of sediment from upstream sources was documented within sub-reach 4 over
WY2017 that will likely test the permanency of the existing pond habitats at lower BBC.

Throughout the literature an increase in pool area, frequency, or depth is largely
considered an improvement to salmon habitat in streams (Cederholm et al. 1997; Roni and Quinn
2001; Roni et al. 2015; O’Neal et al. 2016; Jones et al. 2017). Results from this study might be
important in that they demonstrate the number of bankfull flow days within a given WY might
be more important than wood placement in creating large, deep, slow moving summer habitat
types in low gradient gravel bedded stream reaches like the one at BBC. Even though pool-count
and frequency improved with this project, pool ‘quality’ (in terms of area and depth) decreased.
My results might also lend weight to the observation made by Roni et al. (2015)—that lack of
response at stream restoration sites might be indicative that the existing habitat wasn’t
necessarily degraded. The placement of wood at pools that are greater in area and depth than the
reach average at the beginning of a project might not lead to an increase in these metrics that is
detectible.

In conclusion, a short-term physical assessment of restoration actions at BBC might not
answer longer-term and biological questions posed by the HCIMW (Anderson et al. 2015;

78

Bennett et al. 2016), but it may begin to answer the question posed by Roni et al. (2015); “In
what stream channel types or geomorphic settings can wood placement result in minimal or even
detrimental physical change (i.e., increased erosion and habitat degradation)?” The short-term
results of the project monitoring presented here help answer this question. Observations made by
this study at lower BBC (along with those at similarly executed restoration projects at other
IMW streams; WDFW, unpublished data) suggest that placement of wood structures at or near
the mouth of streams without first understanding/addressing catchment wide water/sediment
delivery to the restoration reach may result in burial of, the complete reorganization of, or loss of
the structures. This might be first reflected in the literature 26 years ago as frequent damage (to
structures) in low-gradient stream segments (Frissell and Nawa 1992), the typical geomorphic
setting associated with the mouth of Puget Sound stream/river catchments (Collins et al. 2002)
commonly associated with the built environment where they are subject to active channel and
catchment management (Curran 2010).
Although damage was only noted at three of the 23 structures added to the lower BBC
channel, sediment accumulation at the structures and resulting bank erosion and channel
avulsions/abandonment might signal some failure of these structures to meet project goals—
assuming that increases in pool habitat (area, frequency, depth) associated with placed wood,
signal ‘improvement’ in salmon habitat—and understanding that the physical success of instream
structures is influenced by many factors, including structure type, materials, and design; stream
power; and the investigators’ definition of failure or success (Roni et al. 2008).

79

Literature Cited
Abbe, T. B., D. R. Montgomery, B. D. Collins, J. M. Buffington, and T. B. Abbe. 2003.
Geomorphic effects of wood in rivers.
Abbe, T. B., G. R. Pess, D. R. Montgomery, and K. Featherson. 2002. Integrating engineered log
jam technology into reach-scale river restoration. Pages 443–482 in D. R. Montgomery, S.
Bolton, and D. B. Booth, editors. Restoration of Puget Sound Rivers. University of
Washington Press, Seattle, WA.
Anderson, J., K. Krueger, B. Ehinger, S. Heerhartz, C. Kinsel, T. Quinn, R. Bilby, and G.
Volkhardt. 2015. Hood Canal Intensively Monitored Watershed Study Plan. Olympia,
Washington.
Beechie, T. J., M. Liermann, M. M. Pollock, S. Baker, and J. Davies. 2006. Channel pattern and
river-floodplain dynamics in forested mountain river systems. Geomorphology 78(1–
2):124–141.
Beechie, T. J., D. A. Sear, J. D. Olden, G. R. Pess, J. M. Buffington, H. Moir, P. Roni, and M.
M. Pollock. 2010. Process-based Principles for Restoring River Ecosystems. BioScience
60(3):209–222. Oxford University Press.
Beechie, T., G. Pess, P. Roni, and G. Giannico. 2008. Setting River Restoration Priorities: A
Review of Approaches and a General Protocol for Identifying and Prioritizing Actions.
North American Journal of Fisheries Management 28(3):891–905.
Bellmore, J. R., C. V. Baxter, K. Martens, and P. J. Connolly. 2013. The floodplain food web
mosaic: a study of its importance to salmon and steelhead with implications for their

80

recovery. Ecological Applications 23(1):189–207. Wiley-Blackwell.
Bennett, S., G. Pess, N. Bouwes, P. Roni, R. E. Bilby, S. Gallagher, J. Ruzycki, T. Buehrens, K.
Krueger, W. Ehinger, J. Anderson, C. Jordan, B. Bowersox, and C. Greene. 2016a. Progress
and Challenges of Testing the Effectiveness of Stream Restoration in the Pacific Northwest
Using Intensively Monitored Watersheds. Fisheries 41(2):92–103.
Bernhardt, E. S., E. B. Sudduth, M. A. Palmer, J. D. Allan, J. L. Meyer, G. Alexander, J.
Follastad-Shah, B. Hassett, R. Jenkinson, R. Lave, J. Rumps, and L. Pagano. 2007.
Restoring Rivers One Reach at a Time: Results from a Survey of U.S. River Restoration
Practitioners. Restoration Ecology 15(3):482–493. Wiley/Blackwell (10.1111).
Bilby, R. E., and J. W. Ward. 1991. Characteristics and Function of Large Woody Debris in
Streams Draining Old-Growth, Clear-Cut, and Second-Growth Forests in Southwestern
Washington. Canadian Journal of Fisheries and Aquatic Sciences 48(12):2499–2508.
Bisson, P. A., J. L. Nielsen, R. A. Palmason, and L. E. Grove. 1982. System of Naming Habitat
Types in Small Streams, With Examples of Habitat Utilization by Salmonids During Low
Streamflow. Pages 62–73 in N. B. Armantrout, editor. Aquisition and Utilization of Aquatic
Habitat Information. American Fisheries Society, Western Division, Portland Oregon.
Bisson, P. A., S. M. Wondzell, and G. H. Reeves. 2003. Trends in using wood to restore aquatic
habitats and fish communities in western North Amaerican rivers. American Fisheries
Society Sympsium 37:391–406.
Booth, D. B., R. A. Haugerud, and K. G. Troost. 2003. Geology, Watersheds, and Puget
Lowland Rivers. Page 505 in D. R. Montgomery, S. Bolton, D. B. Booth, and L. Wall,
editors. Restoration of Pugets Sound Rivers. Center for Water and Watershed Studies in
81

association with University of Washington Press, Seattle.
Buffington, J. M., T. E. Lisle, R. D. Woodsmith, and S. Hilton. 2002. Controls on the size and
occurrence of pools in coarse-grained forest rivers. River Research and Applications
18(6):507–531.
Carah, J. K., C. C. Blencowe, D. W. Wright, and L. A. Bolton. 2014. Low-Cost Restoration
Techniques for Rapidly Increasing Wood Cover in Coastal Coho Salmon Streams. North
American Journal of Fisheries Management 34(5):1003–1013. Wiley-Blackwell.
Cederholm, C., R. Bilby, P. Bisson, T. Bumstead, B. Fransen, W. Scarlett, and J. Ward. 1997a.
Response of juvenile coho salmon and steelhead to placement of large woody debris in a
coastal Washington stream. North American Journal of Fisheries Management 17(4):947–
963.
Cederholm, C. J. 1972. The short-term physical and biological effects of stream channelization at
Big Beef Creek, Kitsap County, Washington. University of Washington, Seattle.
Christian-Smith, J., and A. M. Merenlender. 2010. The disconnect between restoration goals and
practices: A case study of watershed restoration in the Russian River basin, California.
Restoration Ecology 18(1):95–102.
Collins, B. D., D. R. Montgomery, and A. D. Haas. 2002. Historical changes in the distribution
and functions of large wood in Puget Lowland rivers. Canadian Journal of Fisheries and
Aquatic Sciences 59(1):66–76. NRC Research Press Ottawa, Canada .
Crawford, B. 2011a. Protocol for monitoring effectiveness of floodplain enhancement projects
(Dike Removal/Setback, Riprap Removal, Road Removal/Setback, and Landfill Removal,

82

Off- Channel Habitat Creation, Side Channel Creation) Washington Salmon Recovery
Funding Board.
Crawford, B. A. 2011b. Protocol for monitoring effectiveness of instream habitat projects MC-2
Washington Salmon Recovery Funding Board.
Curran, J. C. 2010. Mobility of large woody debris (LWD) jams in a low gradient channel.
ENTRIX. 2010. Geomprphic assessment technical memorandum. Seattle, WA.
Frissell, C. a., and R. K. Nawa. 1992. Incidence and Causes of Physical Failure of Artificial
Habitat Structures in Streams of Western Oregon and Washington. North American Journal
of Fisheries Management 12(1):182–197.
Gregory, K. J. 2006. The human role in changing river channels. Geomorphology 79(3–4):172–
191. Elsevier.
Gurnell, A. M. 1998. The hydrogeomorphological effects of beaver dam-building activity.
Progress in Physical Geography 22(2):167–189.
Gurnell, A. M., H. Pié Gay, F. J. Swanson, and S. V Gregory. 2002. Large wood and fluvial
processes. Freshwater Biology 47:601–619.
Gurney, W. S. C., and J. H. Lawton. 1996. The Population Dynamics of Ecosystem Engineers.
Oikos 76(2):273. WileyNordic Society Oikos.
Hardy, T., P. Panja, D. Mathias, D. M. Winxspro, and a C. C. Section. 2005. WinXSPRO , A
Channel Cross Section Analyzer , User ’ s Manual , Version 3.0. Gen Tech Rep
RMRSGTR147 Fort Collins CO US Department of Agriculture Forest Service Rocky
Mountain Research Station 95 p (January):94.
83

Haugerud, R. A. 2009. Preliminary Geomorphic Map of the Kitsap Peninsula, Washington. U.S.
Geological Survey, Open-File Report 2009-1033, 2 sheets, scale 1:36,000
[https://pubs.usgs.gov/of/2009/1033/].
Haugerud, R. A., and R. W. Tabor. 2008. Geomorphic Evidence for Multiple Large Post-glacial
Earthquakes on the Western Seattle Fault. Page American Geophysical Union, Fall Meeting
2008, abstract id. T23E-05.
Henning, J. A., R. E. Gresswell, and I. A. Fleming. 2007. Use of seasonal freshwater wetlands by
fishes in a temperate river floodplain. Journal of Fish Biology 71(2):476–492.
Hoffman, D. F., and E. J. Gabet. 2007. Effects of sediment pulses on channel morphology in a
gravel-bed river. Geological Society of America Bulletin 119(1–2):116–125.
GeoScienceWorld.
Jähnig, S. C. J., A. W. Lorenz, D. Hering, C. Antons, A. Sundermann, E. Jedicke, and A. P.
Haase. 2011. River restoration success: a question of perception. Ecological Applications
21(6):2007–2015.
Jones, K. K., K. Anlauf-Dunn, P. S. Jacobsen, M. Strickland, L. Tennant, and S. E. Tippery.
2017. Effectiveness of Instream Wood Treatments to Restore Stream Complexity and
Winter Rearing Habitat for Juvenile Coho Salmon.
Kail, J., D. Hering, S. Muhar, M. Gerhard, and S. Preis. 2007. The use of large wood in stream
restoration: Experiences from 50 projects in Germany and Austria. Journal of Applied
Ecology 44(6):1145–1155. Blackwell Publishing Ltd.
Katz, S. L., K. Barnas, R. Hicks, J. Cowen, and R. Jenkinson. 2007. Freshwater Habitat

84

Restoration Actions in the Pacific Northwest: A Decade’s Investment in Habitat
Improvement. Restoration Ecology 15(3):494–505.
Kitsap Public Utility District, Economic, Engineering Services Inc, Pacific Groundwater Group
Inc, Robinson and Noble Inc, and KCM Inc. 1997. Kitsap County Initial Basin Assessment.
Retrieved from http://www.kpud.org/downloads/kc_init-basin-assmnt.pdf.
Kondolf, G. M., and E. R. Micheli. 1995. Evaluating stream restoration projects. Environmental
Management 19(1):1–15. Springer-Verlag.
KPUDhydro (n.d.) Kitsap Public Utility District hydrological data. http://kpudhydrodata.kpud.org/
Krueger, K., K. Pierce, N. Pittman, K. Samson, R. Nauer, D. Price, and T. Quinn. 2010.
Intensively Monitored Watersheds: Habitat Monitoring Report 2010. Washington
Department of Fish and Wildlife Habitat Science Team. Olympia, WA.
Lane, S. N., and K. S. Richards. 1997. Linking river channel form and process: time, space and
casuality revisited. Earth Surface Processes and Landforms 22(3):249–260.
Larson, M. 2000. Effectiveness of Large Woody Debris in Stream Rehabilitation Projects in
Urban Basins.
Larson, M. G., D. B. Booth, and S. A. Morley. 2001. Effectiveness of large woody debris in
stream rehabilitation projects in urban basins. Ecological Engineering 18(2):211–226.
Elsevier.
Leopold, L. B., M. G. Wolman, and J. P. Miller. 1992. Fluvial Processes in Geomorphology.
Dover Publications, Mineola, NY.
Madej, M. 1978. Response of a stream channel to an increase in sediment load. University of
85

Washington, Seattle.
Madej, M. 1982. Sediment transport and channel changes in an aggrading stream in the Puget
Lowland, Washington. Pages 97-18 in, GTRPNW 141, Sediment Budgets and Routing in
Forested Drainage Basins. USFS.
Mangiafico, S. S. 2016. Summary and Analysis of Extension Program Evaluation in R, version
1.15.0. http://rcompanion.org/handbook/.
McCullough, P. H. 2015. Hood Canal Salmon Enhancement Group Lower Big Beef Creek
Restoration - Phase 1 SRFB Project No. 11-1351 - Revised Design. Engineering Services
Associates, Belfair, WA.
McDonald, J. H. 2014. Handbook of Biological Statistics, 3rd edition. Sparky House Publishing.
McHenry, M. L., E. Shott, R. H. Conrad, and G. B. Grette. 1998. Changes in the quantity and
characteristics of large woody debris in streams of the Olympic Peninsula, Washington,
U.S.A. (1982-1993). Canadian Journal of Fisheries and Aquatic Sciences 55(6):1395–1407.
NRC Research Press Ottawa, Canada .
Michael McHenry, George Pess, Tim Abbe, Holly Coe, Jennifer Goldsmith, Martin Liermann,
Randall McCoy, Sarah Morley, R. P. 2007. The Physical and Biological Effects of
Engineered Logjams (ELJs) in the Elwha River, Washington. Elwha River Engineered
Logjam Monitoring Report:90.
Morandi, B., H. Piégay, N. Lamouroux, and L. Vaudor. 2014. How is success or failure in river
restoration projects evaluated? Feedback from French restoration projects. Journal of
Environmental Management 137:178–188. Academic Press.

86

Naiman, R. J., C. A. Johnston, and J. C. Kelley. 1988. Alteration of North American Streams by
Beaver. BioScience 38(11):753–762. Oxford University PressAmerican Institute of
Biological Sciences.
Nichols, R. A., and G. L. Ketcheson. 2013. A Two-Decade Watershed Approach to Stream
Restoration Log Jam Design and Stream Recovery Monitoring: Finney Creek, Washington.
JAWRA Journal of the American Water Resources Association 49(6):1367–1384.
Wiley/Blackwell (10.1111).
O’Neal, J. S., P. Roni, B. Crawford, A. Ritchie, and A. Shelly. 2016. Comparing stream
restoration project effectiveness using a programmatic evaluation of salmonid habitat and
fish response. North American Journal of Fisheries Management 36(3):681–703.
Olson-Rutz, K. M., and C. B. Marlow. 1992. Analysis and Interpretation of Stream Channel
Cross-Sectional Data. North American Journal of Fisheries Management 12:55–61.
Palmer, M. A., E. S. Bernhardt, J. D. Allan, P. S. Lake, G. Alexander, S. Brooks, J. Carr, S.
Clayton, C. N. Dahm, J. Follstad Shah, D. L. Galat, S. G. Loss, P. Goodwin, D. D. Hart, B.
Hassett, R. Jenkinson, G. M. Kondolf, R. Lave, J. L. Meyer, T. K. O’Donnell, L. Pagano,
and E. Sudduth. 2005. Standards for ecologically successful river restoration. Journal of
Applied Ecology 42(2):208–217. Blackwell Science Ltd.
Palmer, M. A., H. L. Menninger, and E. Bernhardt. 2009. River restoration, habitat heterogeneity
and biodiversity: A failure of theory or practice? Freshwater Biology 55(SUPPL. 1):205–
222.
Pollock, M. M., R. J. Naiman, H. E. Erickson, C. A. Johnston, J. Pastor, and G. Pinay. 1995.
Beaver as Engineers: Influences on Biotic and Abiotic Characteristics of Drainage Basins.
87

Pages 117–126 Linking Species & Ecosystems. Springer US, Boston, MA.
Pollock, M. M., G. R. Pess, T. J. Beechie, and D. R. Montgomery. 2004. The Importance of
Beaver Ponds to Coho Salmon Production in the Stillaguamish River Basin, Washington,
USA. North American Journal of Fisheries Management 24(3):749–760. Taylor & Francis
Group .
PRISM. 2018. PRISM Project Search - Washington State Recreation and Conservation Office.
https://secure.rco.wa.gov/prism/search/projectsearch.aspx.
Quinn, T. P., and N. P. Peterson. 1996. The influence of habitat complexity and fish size on
over-winter survival and growth of individually marked juvenile coho salmon (
Oncorhynchus kisutch ) in Big Beef Creek, Washington. Canadian Journal of Fisheries and
Aquatic Sciences 53(7):1555–1564.
R Core Team. 2018. R: A language and environment for statistical computing. R Foundation for
Statistical Computing, Vienna Austria. https://www.r-project.org/.
Roni, P., T. J. Beechie, R. E. Bilby, F. E. Leonetti, M. M. Pollock, and G. R. Pess. 2002. A
Review of Stream Restoration Techniques and a Hierarchical Strategy for Prioritizing
Restoration in Pacific Northwest Watersheds. North American Journal of Fisheries
Management 22(1):1–20.
Roni, P., T. Beechie, G. Pess, and K. Hanson. 2015. Wood placement in river restoration: fact,
fiction, and future direction. Canadian Journal of Fisheries and Aquatic Sciences 72(3):466–
478. NRC Research Press.
Roni, P., K. Hanson, and T. Beechie. 2008a. Global Review of the Physical and Biological

88

Effectiveness of Stream Habitat Rehabilitation Techniques. North American Journal of
Fisheries Management 28(3):856–890.
Roni, P., and T. P. Quinn. 2001. Density and size of juvenile salmonids in response to placement
of large woody debris in western Oregon and Washington streams. Canadian Journal of
Fisheries and Aquatic Sciences 58(2):282–292. NRC Research Press Ottawa, Canada .
Stillwater Sciences. 2008a. Seabeck Creek Channel and Sediment Assessment: Technical
Memorandum. Prepared for the Intensively Monitored Watershed Project, Seattle, WA.
Stillwater Sciences. 2008b. Phase II Little Anderson Creek Habitat Large Woody Debris
Enhancement Designs. Page Prepared for the Hood Canal Salmon Enhancement Group.
Seattle, WA.
Studinski, J. M., K. J. Hartman, J. M. Niles, and P. Keyser. 2012. The effects of riparian forest
disturbance on stream temperature, sedimentation, and morphology. Hydrobiologia
686(1):107–117. Springer Netherlands.
USGS. 2018. USGS Surface Water for USA: Peak Streamflow.
https://nwis.waterdata.usgs.gov/usa/nwis/peak/?site_no=12069550.
Vogel, R. M. 2011. Hydromorphology. Journal of Water Resources Planning and Management
137(2):147–149.
White, J. Q., G. B. Pasternack, and H. J. Moir. 2010. Valley width variation influences rifflepool location and persistence on a rapidly incising gravel-bed river. Geomorphology 121(3–
4):206–221. Elsevier B.V.
Williams, K. R. 1970. Some ecological investigations of Big Beef Creek, 1966-67. University of
89

Washington, Seattle.
Woolsey, S., F. C. Apelli, T. O. Gonser, E. Hoehn, S. Hos, T. Man N, B. Junker, A. P. Aetzold,
C. I. Roulier, S. Schweizer, S. D. T. Iegs, # Klement Tockner, C. W. Eber, A. Nd, and A.
Peter. 2007. A strategy to assess river restoration success. Freshwater Biology 52:752–769.

90

Appendices
Appendix A. Channel cross section plots analyzed within WinXSPRO for WY2014-17 (stations
3-50) and WY2017 only (stations 51-66).
Station 3

14

15

16

17

14

15

Station 4

91

16

17

14

15

16

17

14

15

Station 5

Station 6

92

16

17

14

15

16

17

14

15

Station 7

Station 8

93

16

17

14

15

16

17

14

15

Station 9

Station 10

94

16

17

14

15

16

17

14

15

Station 11

Station 12

95

16

17

14

15

16

17

14

15

Station 13

Station 14

96

16

17

14

15

16

17

14

15

Station 15

Station 16

97

16

17

14

15

16

17

14

15

Station 17

Station 18

98

16

17

14

15

16

17

Station 19

Station 19.5

17

99

Station 20

14

15

16

17

14

15

16

17

Station 21 – main channel

100

Station 21 – left bank side channel

14

15

16

17

14

15

16

17

Station 22 – main channel

101

Station 22 – left bank side channel

14

15

16

17

14

15

16

17

Station 23 – main channel

102

Station 23 – left bank side channel

14

15

16

17

14

15

16

17

Station 24 – main channel

103

Station 24 – right bank side channel

14

15

16

17

14

15

16

17

Station 24 – left bank side channel

104

Station 25 – main channel

14

15

16

17

14

15

16

17

Station 25 – left bank side channel

105

Station 26

14

15

16

17

14

15

16

17

Station 27 – main channel

106

Station 27 – right bank side channel

14

15

16

17

14

15

16

17

Station 28 – main channel

107

Station 28 – right bank side channel

14

15

16

17

14

15

16

17

Station 29 – main channel

108

Station 29 – right bank side channel

14

15

16

17

14

15

16

17

Station 30

109

Station 31

14

15

16

17

14

15

16

17

Station 32

110

Station 33

14

15

16

17

14

15

16

17

Station 34 – main channel

111

Station 34 - right bank side channel

14

15

16

17

14

15

16

17

Station 35

112

Station 36

14

15

16

17

14

15

16

17

Station 37

113

Station 38

14

15

16

17

14

15

16

17

Station 39 – main channel

114

Station 39 – left bank side channel

14

15

16

17

14

15

16

17

Station 40 – main channel

115

Station 40 – left bank side channel

14

15

16

17

14

15

16

17

Station 41 – main channel

116

Station 41 – left bank side channel

14

15

16

17

14

15

16

17

Station 42

117

Station 43

14

15

16

17

14

15

16

17

Station 44

118

Station 45

14

15

16

17

14

15

16

17

Station 46

119

Station 47

14

15

16

17

14

15

16

17

Station 48

120

Station 49

14

15

16

17

14

15

16

17

Station 50

121

Stations 51-66 – water year 2017 only

51

52

53

54

55

56

57

58

122

59

60

61

62

63

64

65

66

123

Appendix B. Data plots analyzed within WinXSPRO for changes in vertical thalweg profile,
WY2014-17 (sub-reaches 1-3) and WY2017 only (sub-reach 4).

Sub-Reach 1

14

15

16

17

14

15

16

17

Sub-Reach 2

124

Sub-Reach 3

14

15

16

17

Sub-Reach 4

17

125

Appendix C. Summary data tables.
Summary of absolute and net changes in vertical thalweg profile area (m2) at lower Big Beef Creek mainstem, water years 20142017. The results for sub-reach 4 are shown as reference but not included in pre/post treatment analysis.

Sub-Reach

Water
Year

Number of
Samples

Sum of
Absolute
Change

Sum of Net
Change

Mean of Net
Change
(CV)

329.0

Mean
Absolute
Change
(CV)
8.66 (1.53)

Pre-Treatment

38

75.2

1.98 (7.95)

1

11

165.2

15.02 (1.48)

98.6

8.96 (2.86)

2014

4

109.0

27.25 (1.27)

76.8

19.20 (2.15)

2015

7

56.2

8.03 (1.05)

21.8

3.11 (3.73)

14

61.3

4.38 (0.72)

-3.9

-0.28 (19.85)

2014

7

25.1

3.59 (0.61)

-8.7

-1.24 (3.41)

2015

7

36.2

5.17 (0.76)

4.8

0.69 (9.90)

13

102.5

7.88 (0.94)

-19.5

-1.50 (7.29)

2014

7

58.6

8.37 (0.67)

2.0

0.29 (37.26)

2015

6

43.9

7.32 (1.32)

-21.5

-3.58 (3.32)

41

528.8

12.90 (1.27)

-83.2

-2.03 (10.26)

17

134.8

7.93 (0.83)

8.4

0.49 (21.19)

2016

7

89.4

12.77 (0.50)

31.2

4.46 (3.24)

2017

10

45.4

4.54 (0.94)

-22.8

-2.28 (2.61)

5

213.5

42.70 (0.67)

-36.9

-7.38 (7.44)

2016

3

133.5

44.50 (0.90)

-30.7

-10.23 (6.49)

2017

2

80.0

40.00 (0.11)

-6.2

-3.10 (18.25)

19

180.5

9.50 (1.02)

-54.7

-2.88 (4.66)

2016

12

73.5

6.13 (0.85)

-18.3

-1.53 (5.32)

2017

7

107.0

15.29 (0.85)

-36.4

-5.20 (3.89)

2017

5

60.0

18.0 (0.89)

-66.8

-13.4 (0.55)

2

3

PostTreatment
1

2

3

4

126

Mean values and coefficient of variation (CV) for channel metrics (1) gradient (% slope), (2) bank height (m), (3) bank width
(m), and (4) channel width to depth ratio (w/d) at lower Big Beef Creek main channel, 2013-2017.

Sub-Reach

Year

Mean Bank
Height (CV)

Mean Bank
Width (CV)

160

Mean
Gradient
(CV)
0.83 (1.22)

0.90 (0.29)

20.85 (0.33)

Mean
Width/Depth
Ratio (CV)
25 (0.44)

48

0.82 (1.27)

0.88 (0.34)

23.46 (0.41)

29 (0.44)

2013

16

0.86 (1.29)

0.78 (0.42)

23.40 (0.42)

34 (0.47)

2014

16

0.81 (1.40)

0.92 (0.33)

23.49 (0.42)

27 (0.39)

2015

16

0.78 (1.15)

0.95 (0.25)

23.49 (0.42)

25 (0.38)

45

0.98 (0.68)

0.87 (0.19)

17.36 (0.27)

21 (0.37)

2013

15

1.01 (0.72)

0.88 (0.19)

17.15 (0.29)

20 (0.38)

2014

15

0.97 (0.59)

0.86 (0.17)

17.48 (0.27)

21 (0.35)

2015

15

0.96 (0.78)

0.87 (0.23)

17.45 (0.27)

21 (0.39)

51

0.78 (1.40)

0.93 (0.27)

20.99 (0.21)

24 (0.37)

2013

17

0.76 (1.56)

0.94 (0.27)

20.99 (0.21)

24 (0.39)

2014

17

0.81 (1.33)

0.94 (0.25)

20.99 (0.21)

24 (0.35)

2015

17

0.78 (1.42)

0.91 (0.29)

20.99 (0.21)

25 (0.39)

2016

16

0.61 (2.52)

0.97 (0.38)

22.43 (0.26)

27 (0.55)

114

0.83 (1.30)

0.88 (0.37)

21.72 (0.33)

28 (0.50)

32

0.82 (1.60)

1.00 (0.33)

24.25 (0.38)

25 (0.35)

2016

16

0.81 (1.84)

1.03 (0.36)

24.00 (0.39)

25 (0.42)

2017

16

0.83 (1.39)

0.98 (0.31)

24.50 (0.37)

26 (0.29)

30

0.84 (0.95)

0.83 (0.38)

16.85 (0.22)

24 (0.57)

2016

15

0.85 (1.15)

0.85 (0.46)

16.71 (0.23)

26 (0.70)

2017

15

0.84 (0.73)

0.82 (0.29)

16.99 (0.21)

22 (0.34)

36

0.86 (1.18)

0.82 (0.40)

22.85 (0.27)

33 (0.54)

2016

18

0.86 (0.70)

0.85 (0.25)

21.47 (0.21)

27 (0.38)

2017

18

0.87 (1.53)

0.80 (0.53)

24.24 (0.30)

38 (0.57)

2017

16

0.74 (1.69)

0.86 (0.31)

23.23 (0.26)

29 (0.38)

Pre-Treatment
1

2

3

4
Post-Treatment
1

2

3

4

Number of
Samples

127

Changes in mean absolute and mean net cross-sectional area (m2) and 3 sub-categories: mean erosion (m2), mean aggradation
(m2), mean degradation (m2) at lower Big Beef Creek main channel, WY’s 2014-2017. Sub-reach 4 is shown as reference but not
included within the pre/post-treatment analysis.

SubReach

Water
Year

Pre-Treatment

96

Mean
Absolute
change
(CV)
2.61 (0.87)

1

32

3.84 (0.75)

0.96 (4.00)

0.13 (2.73)

-1.44 (1.92)

2.28 (0.84)

2014

16

4.04 (0.59)

2.28 (1.01)

0.12 (3.58)

-0.88 (0.80)

3.04 (0.70)

2015

16

3.65 (0.93)

-0.35 (13.29)

0.14 (1.95)

-2.00 (1.91)

1.51 (0.90)

30

1.81 (0.74)

0.15 (8.71)

0.20 (2.96)

-0.83 (0.77)

0.78 (1.36)

2014

15

1.43 (0.55)

-0.30 (1.46)

0.09 (1.62)

-0.87 (0.51)

0.48 (1.05)

2015

15

2.18 (0.76)

0.61 (2.89)

0.31 (2.63)

-0.79 (1.01)

1.08 (1.27)

34

2.16 (0.82)

0.04 (31.49)

0.06 (1.86)

-1.06 (0.88)

1.04 (1.24)

2014

17

2.26 (0.70)

0.22 (5.79)

0.05 (2.14)

-1.02 (0.91)

1.19 (0.91)

2015

17

2.07 (0.95)

-0.15 (5.84)

0.08 (1.68)

-1.11 (0.88)

0.88 (1.24)

Post -Treatment

97

4.37 (0.72)

0.19 (16.67)

0.60 (2.89)

-2.09 (0.82)

1.69 (1.33)

1

32

5.09 (0.81)

1.47 (2.37)

0.90 (2.36)

-1.81 (1.10)

2.38 (1.27)

2016

16

6.07 (0.72)

1.19 (2.63)

1.25 (2.00)

-2.44 (1.03)

2.38 (1.10)

2017

16

4.12 (0.93)

1.74 (2.23)

0.56 (3.05)

-1.19 (0.88)

2.38 (1.46)

31

3.72 (0.47)

-0.23 (13.60)

0.34 (2.64)

-1.97 (0.91)

1.41 (1.09)

2016

15

4.66 (0.31)

-0.65 (6.38)

0.59 (2.07)

-2.65 (0.84)

1.41 (1.14)

2017

16

2.83 (0.57)

0.16 (12.37)

0.09 (1.93)

-1.34 (0.70)

1.40 (1.08)

34

4.30 (0.71)

-0.61 (4.54)

0.55 (3.44)

-2.46 (0.54)

1.29 (1.38)

2016

17

3.58 (0.64)

-0.84 (2.25)

0.11 (1.70)

-2.21 (0.56)

1.26 (1.33)

2017

17

5.03 (0.71)

-0.39 (8.93)

0.99 (2.67)

-2.71 (0.52)

1.33 (1.47)

2017

16

5.83 (0.74)

-2.18 (1.10)

0.86 (2.15)

-4.01 (0.60)

0.97 (1.45)

2

3

2

3

4

Number
of
Samples

Mean net
change area
(CV)

Mean
Erosion
(CV)

Mean
Aggradation
(CV)

Mean
Degradation
(CV)

0.38 (6.41)

0.13 (3.07)

-1.12 (1.55)

1.37 (1.13)

128

Mean values and coefficient of variation (CV) for channel metrics (1) bank height (m), (2) bank width (m), and (3) channel width
to depth ratio at lower Big Beef Creek side channels, 2013-2017.

Sub-Reach

Year

Mean Bank Height
(CV)

Mean Bank
Width (CV)

Mean Width/Depth
Ratio (CV)

Pre-Treatment

Number
of
Samples
39

0.82 (0.28)

10.68 (0.34)

14 (0.41)

2

27

0.85 (0.31)

9.67 (0.35)

12 (0.44)

2013

9

0.85 (0.29)

9.67 (0.36)

12 (0.44)

2014

9

0.88 (0.37)

9.67 (0.36)

12 (0.48)

2015

9

0.83 (0.31)

9.67 (0.36)

12 (0.44)

12

0.75 (0.14)

12.98 (0.25)

18 (0.27)

2013

4

0.72 (0.16)

12.98 (0.28)

19 (0.36)

2014

4

0.78 (0.20)

12.98 (0.28)

17 (0.24)

2015

4

0.76 (0.32)

12.98 (0.34)

17 (0.44)

Post-Treatment

26

0.98 (0.33)

11.15 (0.35)

13 (0.50)

2

18

1.10 (0.28)

10.06 (0.38)

9 (0.34)

2016

9

1.11 (0.31)

10.00 (0.40)

9 (0.37)

2017

9

1.08 (0.27)

10.11 (0.38)

10 (0.33)

8

0.72 (0.21)

13.63 (0.22)

20 (0.30)

2016

4

0.72 (0.28)

12.98 (0.28)

19 (0.38)

2017

4

0.73 (0.17)

14.28 (0.17)

20 (0.27)

3

3

129

Changes in mean absolute and mean net cross-sectional area (m2) and 3 sub-categories: mean erosion (m2), mean aggradation
(m2), mean degradation (m2) at lower Big Beef Creek side channels, WY’s 2014-2017. Sub-reach 4 is shown as reference but not
included within the pre/post-treatment analysis.

SubReach

Water
Year

Mean Net
Change Area
(CV)

Mean
Erosion
(CV)

Mean
Aggradation
(CV)

Mean
Degradation
(CV)

26

Mean
Absolute
Change
Area (CV)
0.58 (0.85)

0.03 (13.84)

0.07 (1.99)

-0.28 (0.97)

0.23 (1.40)

18

0.47 (0.83)

0.02 (17.00)

0.09 (1.80)

-0.23 (1.09)

0.15 (1.10)

2014

9

0.31 (0.73)

-0.11 (1.71)

0.00 (0)

-0.21 (0.69)

0.10 (1.50)

2015

9

0.63 (0.73)

0.14 (2.16)

0.19 (1.07)

-0.24 (1.36)

0.20 (0.87)

8

0.83 (0.77)

0.05 (10.95)

0.03 (1.85)

-0.39 (0.76)

0.41 (1.21)

2014

4

1.00 (0.72)

0.05 (10.13)

0.05 (1.15)

-0.48 (0.50)

0.48 (1.16)

2015

4

0.65 (0.91)

0.05 (13.32)

0.00 (0)

-0.30 (1.19)

0.35 (1.48)

Post-Treatment

26

1.26 (0.94)

0.40 (3.39)

0.14 (2.24)

-0.43 (1.56)

0.69 (1.38)

18

1.12 (1.12)

0.58 (2.17)

0.12 (1.91)

-0.27 (1.41)

0.73 (1.49)

2016

9

1.57 (0.99)

1.06 (1.54)

0.11 (1.88)

-0.26 (1.39)

1.20 (1.14)

2017

9

0.67 (1.00)

0.11 (4.60)

0.13 (2.02)

-0.28 (1.51)

0.26 (1.33)

8

1.58 (0.63)

-0.03 (60.24)

0.18 (2.61)

-0.80 (1.28)

0.60 (1.04)

2016

4

1.90 (0.57)

-0.70 (2.76)

0.33 (2.00)

-1.30 (1.00)

0.28 (0.91)

2017

4

1.25 (0.75)

0.65 (0.91)

0.03 (2.00)

-0.30 (1.05)

0.93 (0.81)

Pre-Treatment
2

3

2

3

Number
of
Samples

130

: Whole Area, all habtypes, pools only, non-pool, avulsion channel at bottom.

Wetted Channel
Pre-Treatment
main.channel
side.channel
Post-Treatment
main.channel
side.channel
Pools
Pre-Treatment
main.channel
side.channel
Post-Treatment
main.channel
side.channel
Non-Pool
Pre-Treatment
main.channel
side.channel
Post-Treatment
main.channel
side.channel
Avulsion Channel
Post-Treatment

Number of
Samples

Total Area (m2)

Mean Unit Area
(CV)

Mean Maximum
Pool Depth (CV)

468
304
164
489
215
274

56712.9
50230.8
6482.1
47380.1
30701.3
16678.8

121.2 (1.50)
165.2 (1.26)
39.5 (1.56)
96.8 (1.47)
142.8 (1.19)
60.9 (1.72)

0.62 (0.52)
0.66 (0.49)
0.49 (0.52)
0.47 (0.57)
0.54 (0.50)
0.42 (0.61)

234
162
72
248
111
137

34619.70
29787.53
4832.17
33894.75
22395.86
11498.89

147.95 (1.34)
183.87 (1.21)
67.11 (1.20)
136.67 (1.30)
201.76 (1.00)
83.93 (1.60)

0.62 (0.52)
0.66 (0.49)
0.49 (0.52)
0.47 (0.57)
0.54 (0.50)
0.42 (0.61)

234
142
92
241
104
137

22093.22
20443.25
1649.97
13485.32
8305.41
5179.91

94.42 (1.71)
143.97 (1.33)
17.93 (1.39)
55.96 (1.35)
79.86 (1.16)
37.81 (1.41)

NA
NA
NA
NA
NA
NA

48

3593.22

74.86 (2.29)

0.37 (0.54)

131

Summary of habitat metrics total area (m2), mean habitat unit area (m2), and mean maximum pool depth (m) including the
coefficient of variation (CV) for mean values. ELJNo whole survey, pools, non pool top, ELJYes whole survey, pools, non pool
bottom

Row Labels
Wet Channel Habitat
Pre-Treatment
main.channel
side.channel
Post-Treatment
main.channel
side.channel
Pools
Pre-Treatment
main.channel
side.channel
Post-Treatment
main.channel
side.channel
Non-Pool
Pre-Treatment
main.channel
side.channel
Post-Treatment
main.channel
side.channel
Wet Channel Habitat
Pre-Treatment
main.channel
side.channel
Post-Treatment
main.channel
side.channel
Pools
Pre-Treatment
main.channel
side.channel
Post-Treatment
main.channel
side.channel
Non-Pool
Pre-Treatment
main.channel
side.channel
Post-Treatment
main.channel
side.channel

Number of
Samples

Total Area (m2)

Mean Unit Area
(CV)

Mean Maximum
Pool Depth (CV)

424
265
159
425
159
266

48191.2
41910.1
6281.1
40125.3
24418.3
15707.0

113.7 (1.54)
158.2 (1.28)
39.5 (1.58)
94.4 (1.53)
153.6 (1.16)
59.1 (1.76)

NA
NA
NA
NA
NA
NA

207
137
70
206
77
129

27630.43
22938.60
4691.83
27277.25
16750.18
10527.07

133.48 (1.36)
167.44 (1.24)
67.03 (1.22)
132.41 (1.39)
217.53 (1.01)
81.61 (1.66)

0.59 (0.53)
0.64 (0.51)
0.49 (0.52)
0.46 (0.60)
0.53 (0.53)
0.41 (0.64)

217
128
89
219
82
137

20560.74
18971.47
1589.27
12848.03
7668.12
5179.91

94.75 (1.75)
148.21 (1.34)
17.86 (1.42)
58.67 (1.32)
93.51 (1.04)
37.81 (1.41)

NA
NA
NA
NA
NA
NA

44
39
5
64
56
8

8521.7
8320.7
201.0
7254.8
6283.0
971.8

193.7 (1.21)
213.35 (1.13)
40.21 (0.75)
113.36 (1.19)
112.20 (1.24)
121.48 (0.87)

0.71 (0.46)
0.71 (0.46)
NA
0.55 (0.43)
0.56 (0.46)
0.51 (0.22)

27
25
2
42
34
8

6989.26
6848.92
140.34
6617.50
5645.68
971.82

258.86 (1.05)
273.96 (1.02)
70.17 (0.33)
157.56 (0.92)
166.05 (0.92)
121.48 (0.87)

0.71 (0.46)
0.71 (0.46)

17
14
3
22
22
0

1532.48
1471.78
60.70
637.29
637.29
NA

90.15 (1.72)
105.13 (1.50)
20.23 (1.26)
28.97 (1.47)
28.97 (1.19)
NA

NA
NA
NA
NA
NA
NA

0.55 (0.43)
0.56 (0.46)
0.51 (0.22)

132